Model info
| Transcription factor | FEZF1 (GeneCards) | ||||||||
| Model | FEZF1_HUMAN.H11MO.0.C | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Data source | ChIP-Seq | ||||||||
| Model release | HOCOMOCOv11 | ||||||||
| Model length | 12 | ||||||||
| Quality | C | ||||||||
| Motif rank | 0 | ||||||||
| Consensus | dhTGYYYWTTYh | ||||||||
| Best auROC (human) | 0.801 | ||||||||
| Best auROC (mouse) | |||||||||
| Peak sets in benchmark (human) | 3 | ||||||||
| Peak sets in benchmark (mouse) | |||||||||
| Aligned words | 500 | ||||||||
| TF family | More than 3 adjacent zinc finger factors {2.3.3} | ||||||||
| TF subfamily | FEZF factors {2.3.3.20} | ||||||||
| HGNC | HGNC:22788 | ||||||||
| EntrezGene | GeneID:389549 (SSTAR profile) | ||||||||
| UniProt ID | FEZF1_HUMAN | ||||||||
| UniProt AC | A0PJY2 (TFClass) | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
| ||||||||
| GTEx tissue expression atlas | FEZF1 expression | ||||||||
| ReMap ChIP-seq dataset list | FEZF1 datasets | ||||||||
| Motifs in JASPAR |
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 153.0 | 61.0 | 181.0 | 105.0 |
| 02 | 66.0 | 243.0 | 37.0 | 154.0 |
| 03 | 35.0 | 16.0 | 11.0 | 438.0 |
| 04 | 6.0 | 10.0 | 475.0 | 9.0 |
| 05 | 7.0 | 278.0 | 51.0 | 164.0 |
| 06 | 13.0 | 217.0 | 26.0 | 244.0 |
| 07 | 31.0 | 363.0 | 13.0 | 93.0 |
| 08 | 120.0 | 30.0 | 7.0 | 343.0 |
| 09 | 3.0 | 67.0 | 25.0 | 405.0 |
| 10 | 10.0 | 5.0 | 9.0 | 476.0 |
| 11 | 22.0 | 58.0 | 35.0 | 385.0 |
| 12 | 86.0 | 166.0 | 79.0 | 169.0 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.2 | -0.705 | 0.366 | -0.172 |
| 02 | -0.628 | 0.659 | -1.189 | 0.206 |
| 03 | -1.242 | -1.975 | -2.311 | 1.245 |
| 04 | -2.819 | -2.394 | 1.326 | -2.484 |
| 05 | -2.694 | 0.793 | -0.879 | 0.269 |
| 06 | -2.163 | 0.546 | -1.525 | 0.663 |
| 07 | -1.358 | 1.058 | -2.163 | -0.291 |
| 08 | -0.04 | -1.389 | -2.694 | 1.002 |
| 09 | -3.325 | -0.613 | -1.561 | 1.167 |
| 10 | -2.394 | -2.961 | -2.484 | 1.328 |
| 11 | -1.681 | -0.754 | -1.242 | 1.117 |
| 12 | -0.368 | 0.281 | -0.452 | 0.298 |