Model info
| Transcription factor | HSF2 (GeneCards) | ||||||||
| Model | HSF2_HUMAN.H11MO.0.A | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Data source | Integrative | ||||||||
| Model release | HOCOMOCOv9 | ||||||||
| Model length | 14 | ||||||||
| Quality | A | ||||||||
| Motif rank | 0 | ||||||||
| Consensus | vSRWbvWKSKvGRh | ||||||||
| Best auROC (human) | |||||||||
| Best auROC (mouse) | |||||||||
| Peak sets in benchmark (human) | |||||||||
| Peak sets in benchmark (mouse) | |||||||||
| Aligned words | 1043 | ||||||||
| TF family | HSF factors {3.4.1} | ||||||||
| TF subfamily | HSF2 (HSTF2) {3.4.1.0.2} | ||||||||
| HGNC | HGNC:5225 | ||||||||
| EntrezGene | GeneID:3298 (SSTAR profile) | ||||||||
| UniProt ID | HSF2_HUMAN | ||||||||
| UniProt AC | Q03933 (TFClass) | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
| ||||||||
| GTEx tissue expression atlas | HSF2 expression | ||||||||
| ReMap ChIP-seq dataset list | HSF2 datasets | ||||||||
| Motifs in JASPAR |
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 355.048 | 272.262 | 321.188 | 91.502 |
| 02 | 69.901 | 87.452 | 797.139 | 85.508 |
| 03 | 780.309 | 71.307 | 121.743 | 66.641 |
| 04 | 720.479 | 63.002 | 115.072 | 141.447 |
| 05 | 125.82 | 239.616 | 291.406 | 383.158 |
| 06 | 316.581 | 197.518 | 432.451 | 93.451 |
| 07 | 99.889 | 37.63 | 81.888 | 820.593 |
| 08 | 67.127 | 50.458 | 96.355 | 826.06 |
| 09 | 46.063 | 826.899 | 125.424 | 41.615 |
| 10 | 70.408 | 143.102 | 168.463 | 658.026 |
| 11 | 605.289 | 184.919 | 181.546 | 68.246 |
| 12 | 17.538 | 123.888 | 842.534 | 56.04 |
| 13 | 754.318 | 64.181 | 118.964 | 102.538 |
| 14 | 572.811 | 168.932 | 144.063 | 154.193 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.31 | 0.046 | 0.21 | -1.032 |
| 02 | -1.296 | -1.077 | 1.116 | -1.099 |
| 03 | 1.095 | -1.276 | -0.751 | -1.342 |
| 04 | 1.015 | -1.397 | -0.807 | -0.603 |
| 05 | -0.719 | -0.081 | 0.113 | 0.386 |
| 06 | 0.196 | -0.273 | 0.506 | -1.011 |
| 07 | -0.946 | -1.894 | -1.141 | 1.145 |
| 08 | -1.335 | -1.612 | -0.981 | 1.151 |
| 09 | -1.7 | 1.152 | -0.722 | -1.798 |
| 10 | -1.289 | -0.592 | -0.43 | 0.925 |
| 11 | 0.841 | -0.338 | -0.356 | -1.319 |
| 12 | -2.609 | -0.734 | 1.171 | -1.511 |
| 13 | 1.061 | -1.379 | -0.774 | -0.92 |
| 14 | 0.786 | -0.428 | -0.585 | -0.518 |