Check the newest release v12
Model info
Transcription factorTCF7L2
(GeneCards)
ModelTF7L2_HUMAN.H11MO.0.A
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length13
Quality
A
Motif rank
0
ConsensusbbCTTTGATSYbb
Best auROC (human)0.962
Best auROC (mouse)0.888
Peak sets in benchmark (human)46
Peak sets in benchmark (mouse)10
Aligned words500
TF familyTCF-7-related factors {4.1.3}
TF subfamilyTCF-7L2 (TCF-4) [1] {4.1.3.0.3}
HGNCHGNC:11641
EntrezGeneGeneID:6934
(SSTAR profile)
UniProt IDTF7L2_HUMAN
UniProt ACQ9NQB0
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 5.372465
0.0005 6.2904599999999995
0.0001 8.12298
GTEx tissue expression atlas TCF7L2 expression
ReMap ChIP-seq dataset list TCF7L2 datasets
Motifs in JASPAR
MA0523.1 (TCF7L2; Homo sapiens)
PCM
ACGT
0149.0175.0154.0122.0
0243.0272.087.098.0
0310.0426.08.056.0
048.016.00.0476.0
051.027.016.0456.0
068.00.02.0490.0
0716.081.0390.013.0
08446.06.08.040.0
09126.04.08.0362.0
1012.0212.0268.08.0
1149.088.025.0338.0
1244.0128.0176.0152.0
1362.0115.0180.0143.0
PWM
ACGT
01-0.9180.3330.206-0.024
02-1.0440.771-0.357-0.24
03-2.3941.217-2.584-0.788
04-2.584-1.975-4.41.328
05-3.903-1.489-1.9751.285
06-2.584-4.4-3.5731.357
07-1.975-0.4271.129-2.163
081.263-2.819-2.584-1.114
090.008-3.126-2.5841.055
10-2.2340.5230.756-2.584
11-0.918-0.346-1.5610.987
12-1.0220.0230.3390.193
13-0.689-0.0820.3610.133