Model info
| Transcription factor | TFAP4 (GeneCards) | ||||||||
| Model | TFAP4_HUMAN.H11MO.0.A | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Data source | ChIP-Seq | ||||||||
| Model release | HOCOMOCOv11 | ||||||||
| Model length | 10 | ||||||||
| Quality | A | ||||||||
| Motif rank | 0 | ||||||||
| Consensus | hCAGCTGdKb | ||||||||
| Best auROC (human) | 0.923 | ||||||||
| Best auROC (mouse) | |||||||||
| Peak sets in benchmark (human) | 7 | ||||||||
| Peak sets in benchmark (mouse) | |||||||||
| Aligned words | 503 | ||||||||
| TF family | bHLH-ZIP factors {1.2.6} | ||||||||
| TF subfamily | AP-4 {1.2.6.4} | ||||||||
| HGNC | HGNC:11745 | ||||||||
| EntrezGene | GeneID:7023 (SSTAR profile) | ||||||||
| UniProt ID | TFAP4_HUMAN | ||||||||
| UniProt AC | Q01664 (TFClass) | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
| ||||||||
| GTEx tissue expression atlas | TFAP4 expression | ||||||||
| ReMap ChIP-seq dataset list | TFAP4 datasets | ||||||||
| Motifs in JASPAR |
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 71.0 | 257.0 | 32.0 | 140.0 |
| 02 | 2.0 | 498.0 | 0.0 | 0.0 |
| 03 | 496.0 | 0.0 | 0.0 | 4.0 |
| 04 | 0.0 | 6.0 | 490.0 | 4.0 |
| 05 | 5.0 | 487.0 | 8.0 | 0.0 |
| 06 | 1.0 | 1.0 | 1.0 | 497.0 |
| 07 | 0.0 | 0.0 | 499.0 | 1.0 |
| 08 | 137.0 | 64.0 | 90.0 | 209.0 |
| 09 | 28.0 | 29.0 | 181.0 | 262.0 |
| 10 | 39.0 | 172.0 | 109.0 | 180.0 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -0.556 | 0.714 | -1.328 | 0.112 |
| 02 | -3.573 | 1.373 | -4.4 | -4.4 |
| 03 | 1.369 | -4.4 | -4.4 | -3.126 |
| 04 | -4.4 | -2.819 | 1.357 | -3.126 |
| 05 | -2.961 | 1.351 | -2.584 | -4.4 |
| 06 | -3.903 | -3.903 | -3.903 | 1.371 |
| 07 | -4.4 | -4.4 | 1.375 | -3.903 |
| 08 | 0.091 | -0.658 | -0.324 | 0.509 |
| 09 | -1.454 | -1.421 | 0.366 | 0.734 |
| 10 | -1.138 | 0.316 | -0.135 | 0.361 |