Model info
| Transcription factor | ZNF547 (GeneCards) | ||||||||
| Model | ZN547_HUMAN.H11MO.0.C | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Data source | ChIP-Seq | ||||||||
| Model release | HOCOMOCOv11 | ||||||||
| Model length | 20 | ||||||||
| Quality | C | ||||||||
| Motif rank | 0 | ||||||||
| Consensus | WSCWMAYKChRCWRRCRbdS | ||||||||
| Best auROC (human) | 0.901 | ||||||||
| Best auROC (mouse) | |||||||||
| Peak sets in benchmark (human) | 4 | ||||||||
| Peak sets in benchmark (mouse) | |||||||||
| Aligned words | 405 | ||||||||
| TF family | More than 3 adjacent zinc finger factors {2.3.3} | ||||||||
| TF subfamily | unclassified {2.3.3.0} | ||||||||
| HGNC | HGNC:26432 | ||||||||
| EntrezGene | GeneID:284306 (SSTAR profile) | ||||||||
| UniProt ID | ZN547_HUMAN | ||||||||
| UniProt AC | Q8IVP9 (TFClass) | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
| ||||||||
| GTEx tissue expression atlas | ZNF547 expression | ||||||||
| ReMap ChIP-seq dataset list | ZNF547 datasets | ||||||||
| Motifs in JASPAR |
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 57.0 | 48.0 | 51.0 | 249.0 |
| 02 | 27.0 | 40.0 | 308.0 | 30.0 |
| 03 | 15.0 | 345.0 | 1.0 | 44.0 |
| 04 | 110.0 | 33.0 | 33.0 | 229.0 |
| 05 | 284.0 | 67.0 | 38.0 | 16.0 |
| 06 | 369.0 | 12.0 | 18.0 | 6.0 |
| 07 | 61.0 | 89.0 | 14.0 | 241.0 |
| 08 | 2.0 | 22.0 | 227.0 | 154.0 |
| 09 | 1.0 | 400.0 | 1.0 | 3.0 |
| 10 | 166.0 | 66.0 | 26.0 | 147.0 |
| 11 | 103.0 | 11.0 | 267.0 | 24.0 |
| 12 | 6.0 | 370.0 | 8.0 | 21.0 |
| 13 | 319.0 | 39.0 | 6.0 | 41.0 |
| 14 | 132.0 | 41.0 | 211.0 | 21.0 |
| 15 | 92.0 | 30.0 | 244.0 | 39.0 |
| 16 | 43.0 | 326.0 | 14.0 | 22.0 |
| 17 | 254.0 | 33.0 | 74.0 | 44.0 |
| 18 | 63.0 | 97.0 | 82.0 | 163.0 |
| 19 | 175.0 | 26.0 | 159.0 | 45.0 |
| 20 | 20.0 | 326.0 | 33.0 | 26.0 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -0.563 | -0.73 | -0.671 | 0.891 |
| 02 | -1.282 | -0.907 | 1.103 | -1.182 |
| 03 | -1.829 | 1.216 | -3.716 | -0.815 |
| 04 | 0.082 | -1.091 | -1.091 | 0.808 |
| 05 | 1.022 | -0.405 | -0.956 | -1.77 |
| 06 | 1.283 | -2.03 | -1.662 | -2.617 |
| 07 | -0.497 | -0.127 | -1.891 | 0.859 |
| 08 | -3.379 | -1.475 | 0.799 | 0.414 |
| 09 | -3.716 | 1.363 | -3.716 | -3.128 |
| 10 | 0.489 | -0.42 | -1.318 | 0.368 |
| 11 | 0.017 | -2.107 | 0.961 | -1.394 |
| 12 | -2.617 | 1.285 | -2.381 | -1.519 |
| 13 | 1.138 | -0.931 | -2.617 | -0.883 |
| 14 | 0.262 | -0.883 | 0.727 | -1.519 |
| 15 | -0.094 | -1.182 | 0.871 | -0.931 |
| 16 | -0.837 | 1.159 | -1.891 | -1.475 |
| 17 | 0.911 | -1.091 | -0.308 | -0.815 |
| 18 | -0.466 | -0.042 | -0.207 | 0.471 |
| 19 | 0.541 | -1.318 | 0.446 | -0.793 |
| 20 | -1.564 | 1.159 | -1.091 | -1.318 |