Model info
Transcription factorAR
ModelANDR_HUMAN.H11MO.0.A
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length18
Quality
A
Motif rank
0
ConsensusWKThYYddbhTRTTTRYh
Best auROC (human)0.9598370988250885
Best auROC (mouse)0.8107911506420812
Peak sets in benchmark (human)461
Peak sets in benchmark (mouse)57
Aligned words499
TF familySteroid hormone receptors (NR3){2.1.1}
TF subfamilyGR-like receptors (NR3C){2.1.1.1}
HGNC644
EntrezGene367
UniProt IDANDR_HUMAN
UniProt ACP10275
Comment
Downloads pcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 5.39981
0.0005 6.33741
0.0001 8.27031
PCM
ACGT
0174.035.018.0372.0
0231.024.0388.056.0
0334.033.07.0425.0
0494.086.072.0247.0
0539.0366.018.076.0
0661.0139.016.0283.0
0790.067.098.0244.0
0899.089.0108.0203.0
0988.096.0111.0204.0
10100.0128.060.0211.0
1136.07.07.0449.0
12127.015.0345.012.0
1314.011.010.0464.0
149.03.049.0438.0
154.04.032.0459.0
16210.014.0247.028.0
1743.0262.024.0170.0
18145.079.027.0248.0
PWM
ACGT
01-0.514-1.24-1.8661.084
02-1.356-1.5981.126-0.786
03-1.268-1.296-2.6921.217
04-0.279-0.366-0.5410.677
05-1.1361.068-1.866-0.488
06-0.7030.107-1.9730.812
07-0.322-0.611-0.2380.665
08-0.228-0.333-0.1420.482
09-0.344-0.258-0.1150.487
10-0.2180.025-0.7190.521
11-1.213-2.692-2.6921.272
120.018-2.0321.009-2.232
13-2.094-2.309-2.3921.305
14-2.482-3.323-0.9161.247
15-3.124-3.124-1.3261.294
160.516-2.0940.677-1.452
17-1.0420.736-1.5980.306
180.149-0.45-1.4870.681