Model info
Transcription factorAR
ModelANDR_HUMAN.H11MO.1.A
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length16
Quality
A
Motif rank
1
ConsensusdGnACWbTbWGTdCYb
Best auROC (human)0.9698004794600936
Best auROC (mouse)0.991201831346464
Peak sets in benchmark (human)461
Peak sets in benchmark (mouse)57
Aligned words500
TF familySteroid hormone receptors (NR3){2.1.1}
TF subfamilyGR-like receptors (NR3C){2.1.1.1}
HGNC644
EntrezGene367
UniProt IDANDR_HUMAN
UniProt ACP10275
Comment
Downloads pcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 4.58451
0.0005 5.53841
0.0001 7.47961
GTEx tissue expression atlas AR expression
ReMap ChIP-seq dataset list AR datasets
Motifs in JASPAR
PCM
ACGT
01181.012.0228.079.0
0254.013.0404.029.0
03186.0105.0112.097.0
04413.025.025.037.0
051.0466.015.018.0
06349.012.039.0100.0
0763.0115.0176.0146.0
080.00.0192.0308.0
0958.0178.0200.064.0
1073.033.07.0387.0
112.016.0481.01.0
1243.021.011.0425.0
13105.085.097.0213.0
1437.0403.03.057.0
1546.0206.07.0241.0
1671.0131.098.0200.0
PWM
ACGT
010.366-2.2340.595-0.452
02-0.823-2.1631.165-1.421
030.393-0.172-0.108-0.25
041.187-1.561-1.561-1.189
05-3.9031.307-2.034-1.868
061.019-2.234-1.138-0.22
07-0.673-0.0820.3390.154
08-4.4-4.40.4250.894
09-0.7540.350.465-0.658
10-0.529-1.298-2.6941.122
11-3.573-1.9751.338-3.903
12-1.044-1.725-2.3111.215
13-0.172-0.38-0.250.528
14-1.1891.162-3.325-0.771
15-0.9790.495-2.6940.651
16-0.5560.046-0.240.465