Model info
Transcription factorAR
ModelANDR_HUMAN.H11MO.2.A
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length12
Quality
A
Motif rank
2
ConsensusnhbTGTKCYhdb
Best auROC (human)0.9012012829507474
Best auROC (mouse)0.8873569296976669
Peak sets in benchmark (human)461
Peak sets in benchmark (mouse)57
Aligned words500
TF familySteroid hormone receptors (NR3){2.1.1}
TF subfamilyGR-like receptors (NR3C){2.1.1.1}
HGNC644
EntrezGene367
UniProt IDANDR_HUMAN
UniProt ACP10275
Comment
Downloads pcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 5.61821
0.0005 6.49566
0.0001 7.87286
GTEx tissue expression atlas AR expression
ReMap ChIP-seq dataset list AR datasets
Motifs in JASPAR
PCM
ACGT
0170.0162.0121.0147.0
02124.065.059.0252.0
0369.0195.0159.077.0
0423.08.01.0468.0
053.010.0485.02.0
065.06.01.0488.0
0727.060.094.0319.0
080.0492.03.05.0
0914.0203.02.0281.0
1086.0119.057.0238.0
1193.070.0135.0202.0
1261.0109.0121.0209.0
PWM
ACGT
01-0.570.256-0.0320.16
02-0.008-0.643-0.7370.695
03-0.5840.440.238-0.477
04-1.64-2.584-3.9031.311
05-3.325-2.3941.347-3.573
06-2.961-2.819-3.9031.353
07-1.489-0.721-0.2810.929
08-4.41.361-3.325-2.961
09-2.0960.48-3.5730.803
10-0.368-0.049-0.7710.638
11-0.291-0.570.0760.475
12-0.705-0.135-0.0320.509