Model info
Transcription factorAr
ModelANDR_MOUSE.H11MO.1.A
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length12
Quality
A
Motif rank
1
ConsensusdbYbTGTbCYbd
Best auROC (human)0.8973565309918162
Best auROC (mouse)0.929116581436411
Peak sets in benchmark (human)461
Peak sets in benchmark (mouse)57
Aligned words500
TF familySteroid hormone receptors (NR3){2.1.1}
TF subfamilyGR-like receptors (NR3C){2.1.1.1}
MGI88064
EntrezGene11835
UniProt IDANDR_MOUSE
UniProt ACP19091
Comment
Downloads pcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 5.55761
0.0005 6.50176
0.0001 8.02401
GTEx tissue expression atlas Ar expression
ReMap ChIP-seq dataset list Ar datasets
Motifs in JASPAR
PCM
ACGT
01254.040.054.0152.0
0241.0215.0162.082.0
0391.0116.017.0276.0
0436.0174.0183.0107.0
0513.011.02.0474.0
061.01.0492.06.0
074.00.03.0493.0
0834.0118.086.0262.0
091.0487.00.012.0
1026.0183.04.0287.0
1138.0100.0106.0256.0
1283.080.0154.0183.0
PWM
ACGT
010.703-1.114-0.8230.193
02-1.090.5370.256-0.415
03-0.313-0.074-1.920.785
04-1.2150.3270.377-0.153
05-2.163-2.311-3.5731.324
06-3.903-3.9031.361-2.819
07-3.126-4.4-3.3251.363
08-1.27-0.057-0.3680.734
09-3.9031.351-4.4-2.234
10-1.5250.377-3.1260.824
11-1.163-0.22-0.1630.711
12-0.403-0.4390.2060.377