Model info
Transcription factorArnt
ModelARNT_MOUSE.H11MO.0.B
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceIntegrative
Model releaseHOCOMOCOv9
Model length8
Quality
B
Motif rank
0
ConsensusbYACGTGh
Best auROC (human)
Best auROC (mouse)
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)
Aligned words283
TF familyPAS domain factors{1.2.5}
TF subfamilyArnt-like factors{1.2.5.2}
MGI88071
EntrezGene11863
UniProt IDARNT_MOUSE
UniProt ACP53762
Comment
Downloads pcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 2.1138
0.0005 2.66382
0.0001 5.419
GTEx tissue expression atlas Arnt expression
Motifs in JASPAR
PCM
ACGT
0127.55166.00263.374110.872
0212.601139.09116.599.607
03145.5650.0122.2330.0
040.0267.7980.00.0
050.00.0267.7980.0
060.00.00.0267.798
070.00.0267.7980.0
0850.292148.11714.29655.093
PWM
ACGT
01-0.859-0.014-0.0540.496
02-1.5860.721-1.340.391
030.766-3.890.593-3.89
04-3.891.371-3.89-3.89
05-3.89-3.891.371-3.89
06-3.89-3.89-3.891.371
07-3.89-3.891.371-3.89
08-0.2790.783-1.471-0.191