Model info
Transcription factorARX
ModelARX_HUMAN.H11MO.0.D
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceHT-SELEX
Model releaseHOCOMOCOv10
Model length13
Quality
D
Motif rank
0
ConsensushTAATYTAATTWv
Best auROC (human)
Best auROC (mouse)
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)
Aligned words623
TF familyPaired-related HD factors{3.1.3}
TF subfamilyARX{3.1.3.3}
HGNC18060
EntrezGene170302
UniProt IDARX_HUMAN
UniProt ACQ96QS3
Comment
Downloads pcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 3.57821
0.0005 4.96177
0.0001 7.74175
GTEx tissue expression atlas ARX expression
ReMap ChIP-seq dataset list ARX datasets
Motifs in JASPAR
PCM
ACGT
0196.228175.38296.213255.178
0237.20535.86235.191514.742
03601.2083.02110.3928.378
04606.0762.51811.2173.189
052.51849.4293.861567.193
060.168253.04416.252353.536
070.168161.0880.839460.905
08586.940.83934.3810.839
09621.1540.1680.1681.511
100.5040.5040.504621.489
1110.7280.6710.671610.929
12464.69851.42552.09654.782
13194.988103.748230.57393.691
PWM
ACGT
01-0.4750.118-0.4750.49
02-1.4-1.435-1.4531.188
031.343-3.526-2.574-2.757
041.351-3.641-2.507-3.49
05-3.641-1.126-3.3591.285
06-4.4840.481-2.1760.814
07-4.4840.033-4.1631.078
081.319-4.163-1.475-4.163
091.376-4.484-4.484-3.921
10-4.311-4.311-4.3111.376
11-2.546-4.234-4.2341.359
121.086-1.088-1.075-1.026
130.223-0.4010.389-0.502