Model info
Transcription factorAtf1
ModelATF1_MOUSE.H11MO.0.B
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceIntegrative
Model releaseHOCOMOCOv9
Model length10
Quality
B
Motif rank
0
ConsensusnTGACGTSMv
Best auROC (human)
Best auROC (mouse)
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)
Aligned words43
TF familyCREB-related factors{1.1.7}
TF subfamilyCREB-like factors{1.1.7.1}
MGI1298366
EntrezGene11908
UniProt IDATF1_MOUSE
UniProt ACP81269
Comment
Downloads pcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 3.79346
0.0005 4.70565
0.0001 6.27772
GTEx tissue expression atlas Atf1 expression
ReMap ChIP-seq dataset list Atf1 datasets
Motifs in JASPAR
PCM
ACGT
0110.33811.49711.4970.419
020.00.00.033.751
030.00.033.7510.0
0433.7510.00.00.0
050.032.7211.0310.0
061.0310.032.7210.0
070.6442.3830.030.724
082.7719.0018.8893.092
0925.0565.2822.1261.288
106.53813.23610.0163.961
PWM
ACGT
010.1860.2840.284-1.971
02-2.36-2.36-2.361.313
03-2.36-2.361.313-2.36
041.313-2.36-2.36-2.36
05-2.361.283-1.585-2.36
06-1.585-2.361.283-2.36
07-1.811-1.049-2.361.221
08-0.9370.7580.047-0.853
091.024-0.414-1.132-1.458
10-0.2280.4150.156-0.655