Model info
Transcription factorAtf2
ModelATF2_MOUSE.H11MO.0.A
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length11
Quality
A
Motif rank
0
ConsensusdvTGAbGWMAb
Best auROC (human)0.751
Best auROC (mouse)0.849
Peak sets in benchmark (human)8
Peak sets in benchmark (mouse)4
Aligned words502
TF familyJun-related factors {1.1.1}
TF subfamilyATF-2-like factors {1.1.1.3}
MGIMGI:109349
EntrezGeneGeneID:102641666; 11909
(SSTAR profile)
UniProt IDATF2_MOUSE
UniProt ACP16951
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 4.648515
0.0005 5.554755
0.0001 7.26621
GTEx tissue expression atlas Atf2 expression
Motifs in JASPAR
PCM
ACGT
01158.044.0232.066.0
02212.083.0192.013.0
0310.012.06.0472.0
048.07.0470.015.0
05452.06.07.035.0
0617.0181.0124.0178.0
071.021.0467.011.0
0863.036.013.0388.0
0979.0388.018.015.0
10438.09.032.021.0
1131.0127.092.0250.0
PWM
ACGT
010.232-1.0220.613-0.628
020.523-0.4030.425-2.163
03-2.394-2.234-2.8191.32
04-2.584-2.6941.315-2.034
051.276-2.819-2.694-1.242
06-1.920.366-0.0080.35
07-3.903-1.7251.309-2.311
08-0.673-1.215-2.1631.124
09-0.4521.124-1.868-2.034
101.245-2.484-1.328-1.725
11-1.3580.016-0.3020.687