Model info
Transcription factorBarx1
ModelBARX1_MOUSE.H11MO.0.C
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length12
Quality
C
Motif rank
0
ConsensusbbWAAdKGYYWh
Best auROC (human)0.5291255787838475
Best auROC (mouse)0.8185742911088966
Peak sets in benchmark (human)2
Peak sets in benchmark (mouse)2
Aligned words150
TF familyNK-related factors{3.1.2}
TF subfamilyBARX{3.1.2.2}
MGI103124
EntrezGene12022
UniProt IDBARX1_MOUSE
UniProt ACQ9ER42
Comment
Downloads pcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 5.78352
0.0005 6.40365
0.0001 7.61454
GTEx tissue expression atlas Barx1 expression
ReMap ChIP-seq dataset list Barx1 datasets
Motifs in JASPAR
PCM
ACGT
0120.028.050.052.0
0221.049.028.052.0
0330.018.07.095.0
04119.012.018.01.0
05146.03.00.01.0
0619.015.039.077.0
0715.01.045.089.0
082.08.0139.01.0
0912.043.06.089.0
1022.024.02.0102.0
1122.016.018.094.0
1228.026.018.078.0
PWM
ACGT
01-0.601-0.2810.280.318
02-0.5550.26-0.2810.318
03-0.215-0.7-1.5470.91
041.132-1.073-0.7-2.845
051.335-2.21-3.432-2.845
06-0.649-0.8690.0380.703
07-0.869-2.8450.1770.845
08-2.478-1.4321.286-2.845
09-1.0730.133-1.6760.845
10-0.511-0.428-2.4780.98
11-0.511-0.809-0.70.899
12-0.281-0.352-0.70.715