Model info
Transcription factorBarx2
ModelBARX2_MOUSE.H11MO.0.D
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceIntegrative
Model releaseHOCOMOCOv9
Model length10
Quality
D
Motif rank
0
ConsensushYnWTAATKR
Best auROC (human)
Best auROC (mouse)
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)
Aligned words14
TF familyNK-related factors {3.1.2}
TF subfamilyBARX {3.1.2.2}
MGIMGI:109617
EntrezGeneGeneID:12023
(SSTAR profile)
UniProt IDBARX2_MOUSE
UniProt ACO08686
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 5.537195
0.0005 6.222395000000001
0.0001 7.4517050000000005
GTEx tissue expression atlas Barx2 expression
Motifs in JASPAR
PCM
ACGT
011.9841.9840.9929.039
020.06.0631.9845.953
035.9531.9844.0791.984
043.9692.0940.07.937
050.00.00.014.0
0613.0080.00.9920.0
0714.00.00.00.0
080.00.00.014.0
090.00.9926.0636.945
104.9610.07.0551.984
PWM
ACGT
01-0.453-0.453-0.9240.847
02-1.8410.48-0.4530.464
030.464-0.4530.13-0.453
040.107-0.412-1.8410.726
05-1.841-1.841-1.8411.26
061.19-1.841-0.924-1.841
071.26-1.841-1.841-1.841
08-1.841-1.841-1.8411.26
09-1.841-0.9240.480.603
100.301-1.8410.618-0.453