Model info
Transcription factorBarx2
ModelBARX2_MOUSE.H11MO.0.D
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceIntegrative
Model releaseHOCOMOCOv9
Model length10
Quality
D
Motif rank
0
ConsensushYnWTAATKR
Best auROC (human)
Best auROC (mouse)
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)
Aligned words14
TF familyNK-related factors{3.1.2}
TF subfamilyBARX{3.1.2.2}
MGI109617
EntrezGene12023
UniProt IDBARX2_MOUSE
UniProt ACO08686
Comment
Downloads pcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 5.53782
0.0005 6.23114
0.0001 7.45775
GTEx tissue expression atlas Barx2 expression
ReMap ChIP-seq dataset list Barx2 datasets
Motifs in JASPAR
PCM
ACGT
011.9841.9840.9929.039
020.06.0631.9845.953
035.9531.9844.0791.984
043.9692.0940.07.937
050.00.00.014.0
0613.0080.00.9920.0
0714.00.00.00.0
080.00.00.014.0
090.00.9926.0636.945
104.9610.07.0551.984
PWM
ACGT
01-0.453-0.453-0.9240.847
02-1.8410.48-0.4530.464
030.464-0.4530.13-0.453
040.107-0.412-1.8410.726
05-1.841-1.841-1.8411.26
061.19-1.841-0.924-1.841
071.26-1.841-1.841-1.841
08-1.841-1.841-1.8411.26
09-1.841-0.9240.480.603
100.301-1.8410.618-0.453