Model info
| Transcription factor | ARNTL | ||||||||
| Model | BMAL1_HUMAN.H11MO.0.A | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Data source | ChIP-Seq | ||||||||
| Model release | HOCOMOCOv11 | ||||||||
| Model length | 11 | ||||||||
| Quality | A | ||||||||
| Motif rank | 0 | ||||||||
| Consensus | vvdCACRTGSn | ||||||||
| Best auROC (human) | 0.86415613517611 | ||||||||
| Best auROC (mouse) | 0.8750691697713978 | ||||||||
| Peak sets in benchmark (human) | 18 | ||||||||
| Peak sets in benchmark (mouse) | 15 | ||||||||
| Aligned words | 410 | ||||||||
| TF family | PAS domain factors{1.2.5} | ||||||||
| TF subfamily | Arnt-like factors{1.2.5.2} | ||||||||
| HGNC | 701 | ||||||||
| EntrezGene | 406 | ||||||||
| UniProt ID | BMAL1_HUMAN | ||||||||
| UniProt AC | O00327 | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
|
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 163.0 | 59.0 | 131.0 | 57.0 |
| 02 | 67.0 | 120.0 | 202.0 | 21.0 |
| 03 | 104.0 | 11.0 | 109.0 | 186.0 |
| 04 | 8.0 | 400.0 | 2.0 | 0.0 |
| 05 | 399.0 | 5.0 | 0.0 | 6.0 |
| 06 | 8.0 | 390.0 | 9.0 | 3.0 |
| 07 | 86.0 | 14.0 | 300.0 | 10.0 |
| 08 | 23.0 | 14.0 | 5.0 | 368.0 |
| 09 | 2.0 | 1.0 | 380.0 | 27.0 |
| 10 | 5.0 | 120.0 | 214.0 | 71.0 |
| 11 | 126.0 | 152.0 | 66.0 | 66.0 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.459 | -0.542 | 0.242 | -0.575 |
| 02 | -0.418 | 0.156 | 0.671 | -1.531 |
| 03 | 0.014 | -2.118 | 0.061 | 0.589 |
| 04 | -2.393 | 1.351 | -3.391 | -4.236 |
| 05 | 1.348 | -2.772 | -4.236 | -2.629 |
| 06 | -2.393 | 1.326 | -2.293 | -3.139 |
| 07 | -0.173 | -1.903 | 1.064 | -2.202 |
| 08 | -1.446 | -1.903 | -2.772 | 1.268 |
| 09 | -3.391 | -3.727 | 1.3 | -1.294 |
| 10 | -2.772 | 0.156 | 0.729 | -0.361 |
| 11 | 0.204 | 0.389 | -0.432 | -0.432 |