Model info
Transcription factorARNTL
ModelBMAL1_HUMAN.H11MO.0.A
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length11
Quality
A
Motif rank
0
ConsensusnSCAYGTGhbb
Best auROC (human)0.86415613517611
Best auROC (mouse)0.8750691697713978
Peak sets in benchmark (human)18
Peak sets in benchmark (mouse)15
Aligned words410
TF familyPAS domain factors{1.2.5}
TF subfamilyArnt-like factors{1.2.5.2}
HGNC701
EntrezGene406
UniProt IDBMAL1_HUMAN
UniProt ACO00327
Comment
Downloads pcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 3.96501
0.0005 4.81331
0.0001 6.4817
GTEx tissue expression atlas ARNTL expression
ReMap ChIP-seq dataset list ARNTL datasets
Motifs in JASPAR
PCM
ACGT
0166.066.0152.0126.0
0271.0214.0120.05.0
0327.0380.01.02.0
04368.05.014.023.0
0510.0300.014.086.0
063.09.0390.08.0
076.00.05.0399.0
080.02.0400.08.0
09186.0109.011.0104.0
1021.0202.0120.067.0
1157.0131.059.0163.0
PWM
ACGT
01-0.432-0.4320.3890.204
02-0.3610.7290.156-2.772
03-1.2941.3-3.727-3.391
041.268-2.772-1.903-1.446
05-2.2021.064-1.903-0.173
06-3.139-2.2931.326-2.393
07-2.629-4.236-2.7721.348
08-4.236-3.3911.351-2.393
090.5890.061-2.1180.014
10-1.5310.6710.156-0.418
11-0.5750.242-0.5420.459