Model info
Transcription factorARNTL
ModelBMAL1_HUMAN.H11MO.0.A
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length11
Quality
A
Motif rank
0
ConsensusvvdCACRTGSn
Best auROC (human)0.86415613517611
Best auROC (mouse)0.8750691697713978
Peak sets in benchmark (human)18
Peak sets in benchmark (mouse)15
Aligned words410
TF familyPAS domain factors{1.2.5}
TF subfamilyArnt-like factors{1.2.5.2}
HGNC701
EntrezGene406
UniProt IDBMAL1_HUMAN
UniProt ACO00327
Comment
Downloads pcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 3.96501
0.0005 4.81285
0.0001 6.48091
PCM
ACGT
01163.059.0131.057.0
0267.0120.0202.021.0
03104.011.0109.0186.0
048.0400.02.00.0
05399.05.00.06.0
068.0390.09.03.0
0786.014.0300.010.0
0823.014.05.0368.0
092.01.0380.027.0
105.0120.0214.071.0
11126.0152.066.066.0
PWM
ACGT
010.459-0.5420.242-0.575
02-0.4180.1560.671-1.531
030.014-2.1180.0610.589
04-2.3931.351-3.391-4.236
051.348-2.772-4.236-2.629
06-2.3931.326-2.293-3.139
07-0.173-1.9031.064-2.202
08-1.446-1.903-2.7721.268
09-3.391-3.7271.3-1.294
10-2.7720.1560.729-0.361
110.2040.389-0.432-0.432