Model info
Transcription factorNR2F1
ModelCOT1_HUMAN.H11MO.0.C
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length17
Quality
C
Motif rank
0
ConsensusvRRRbvRRAGGKCAdvv
Best auROC (human)0.8792893712103934
Best auROC (mouse)
Peak sets in benchmark (human)3
Peak sets in benchmark (mouse)
Aligned words501
TF familyRXR-related receptors (NR2){2.1.3}
TF subfamilyCOUP-like receptors (NR2F){2.1.3.5}
HGNC7975
EntrezGene7025
UniProt IDCOT1_HUMAN
UniProt ACP10589
Comment
Downloads pcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 4.45971
0.0005 5.41421
0.0001 7.34181
PCM
ACGT
0190.073.0270.067.0
02144.037.0275.044.0
03124.039.0296.041.0
04104.059.0295.042.0
0543.075.0181.0201.0
0666.0238.0145.051.0
07316.056.097.031.0
08206.024.0262.08.0
09363.00.0135.02.0
109.00.0456.035.0
118.05.0481.06.0
125.039.0140.0316.0
1333.0432.021.014.0
14480.02.08.010.0
15102.063.0259.076.0
16113.092.0247.048.0
1793.084.0253.070.0
PWM
ACGT
01-0.324-0.5290.763-0.613
020.14-1.1890.782-1.022
03-0.008-1.1380.855-1.09
04-0.181-0.7370.852-1.067
05-1.044-0.5030.3660.47
06-0.6280.6380.147-0.879
070.92-0.788-0.25-1.358
080.495-1.60.734-2.584
091.058-4.40.076-3.573
10-2.484-4.41.285-1.242
11-2.584-2.9611.338-2.819
12-2.961-1.1380.1120.92
13-1.2981.231-1.725-2.096
141.336-3.573-2.584-2.394
15-0.201-0.6730.722-0.49
16-0.1-0.3020.675-0.938
17-0.291-0.3920.699-0.57