Model info
Transcription factorNr2f2
ModelCOT2_MOUSE.H11MO.1.B
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceIntegrative
Model releaseHOCOMOCOv9
Model length15
Quality
B
Motif rank
1
ConsensusvRGKbCAdRGRKYvv
Best auROC (human)0.9
Best auROC (mouse)0.758
Peak sets in benchmark (human)28
Peak sets in benchmark (mouse)3
Aligned words82
TF familyRXR-related receptors (NR2) {2.1.3}
TF subfamilyCOUP-like receptors (NR2F) {2.1.3.5}
MGIMGI:1352452
EntrezGeneGeneID:11819
(SSTAR profile)
UniProt IDCOT2_MOUSE
UniProt ACP43135
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 5.45761
0.0005 6.16501
0.0001 7.62341
GTEx tissue expression atlas Nr2f2 expression
Motifs in JASPAR
PCM
ACGT
0132.01716.8823.1066.94
0243.870.91420.90713.252
037.1972.17162.6066.969
045.0271.02856.03716.851
057.4269.82516.45145.241
060.072.2034.572.171
0771.7464.1130.03.085
0842.9567.42620.5647.997
0943.2423.08521.99210.625
1014.3950.059.2935.255
1111.5395.3751.75310.282
127.2268.76816.70846.241
135.14148.6699.36815.766
1445.81210.51115.7666.855
1533.47418.73614.85211.882
PWM
ACGT
010.464-0.1470.15-0.953
020.77-2.340.055-0.373
03-0.921-1.8541.118-0.949
04-1.225-2.2851.009-0.149
05-0.894-0.646-0.1720.8
06-2.9481.258-1.303-1.854
071.252-1.387-2.948-1.607
080.749-0.8940.039-0.829
090.755-1.6070.103-0.575
10-0.296-2.9481.064-1.188
11-0.5-1.170.931-0.605
12-0.918-0.748-0.1570.821
13-1.2060.871-0.689-0.211
140.812-0.585-0.211-0.964
150.507-0.049-0.267-0.473