Model info
Transcription factorNr2f2
ModelCOT2_MOUSE.H11MO.2.B
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length17
Quality
B
Motif rank
2
ConsensusdRdvbhWRAGGKCAvvv
Best auROC (human)0.9152081836788205
Best auROC (mouse)0.731996716668941
Peak sets in benchmark (human)28
Peak sets in benchmark (mouse)3
Aligned words503
TF familyRXR-related receptors (NR2){2.1.3}
TF subfamilyCOUP-like receptors (NR2F){2.1.3.5}
MGI1352452
EntrezGene11819
UniProt IDCOT2_MOUSE
UniProt ACP43135
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 5.08046
0.0005 5.94471
0.0001 7.71231
GTEx tissue expression atlas Nr2f2 expression
Motifs in JASPAR
PCM
ACGT
01158.043.0215.084.0
02132.023.0282.063.0
03135.051.0254.060.0
0491.092.0256.061.0
0564.0132.0100.0204.0
0699.0272.062.067.0
07319.038.059.084.0
08249.012.0229.010.0
09366.01.0129.04.0
1013.02.0450.035.0
1114.05.0455.026.0
126.024.092.0378.0
1335.0416.024.025.0
14479.07.08.06.0
15113.090.0208.089.0
16151.098.0187.064.0
17130.077.0232.061.0
PWM
ACGT
010.232-1.0440.537-0.392
020.054-1.640.807-0.673
030.076-0.8790.703-0.721
04-0.313-0.3020.711-0.705
05-0.6580.054-0.220.485
06-0.230.771-0.689-0.613
070.929-1.163-0.737-0.392
080.683-2.2340.6-2.394
091.066-3.9030.031-3.126
10-2.163-3.5731.272-1.242
11-2.096-2.9611.283-1.525
12-2.819-1.6-0.3021.098
13-1.2421.194-1.6-1.561
141.334-2.694-2.584-2.819
15-0.1-0.3240.504-0.335
160.187-0.240.399-0.658
170.039-0.4770.613-0.705