Model info
Transcription factorCxxc1
ModelCXXC1_MOUSE.H11MO.0.D
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceIntegrative
Model releaseHOCOMOCOv9
Model length7
Quality
D
Motif rank
0
ConsensusYGKTKKY
Best auROC (human)
Best auROC (mouse)
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)
Aligned words63
TF family
TF subfamily
MGI1921572
EntrezGene74322
UniProt IDCXXC1_MOUSE
UniProt ACQ9CWW7
Comment
Downloads pcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 4.22958
0.0005 4.48697
0.0001 5.2683
GTEx tissue expression atlas Cxxc1 expression
ReMap ChIP-seq dataset list Cxxc1 datasets
Motifs in JASPAR
PCM
ACGT
015.02342.9310.5589.488
020.00.055.0232.977
034.0875.57617.47130.866
040.00.08.55249.448
055.2090.74436.4215.627
062.9770.74428.23426.045
078.9331.2112.23215.627
PWM
ACGT
01-0.9441.041-2.289-0.39
02-2.727-2.7271.284-1.358
03-1.112-0.8560.1750.72
04-2.727-2.727-0.4831.179
05-0.913-2.1770.8810.07
06-1.358-2.1770.6340.556
07-0.4450.731-1.5640.07