Model info
Transcription factorElf5
ModelELF5_MOUSE.H11MO.0.A
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length17
Quality
A
Motif rank
0
ConsensusRRRARRAGGAARddvnd
Best auROC (human)0.8449093520323858
Best auROC (mouse)0.9912007157350601
Peak sets in benchmark (human)3
Peak sets in benchmark (mouse)12
Aligned words501
TF familyEts-related factors{3.5.2}
TF subfamilyEHF-like factors{3.5.2.4}
MGI1335079
EntrezGene13711
UniProt IDELF5_MOUSE
UniProt ACQ8VDK3
Comment
Downloads pcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 4.06741
0.0005 5.32341
0.0001 7.86891
GTEx tissue expression atlas Elf5 expression
ReMap ChIP-seq dataset list Elf5 datasets
Motifs in JASPAR
PCM
ACGT
01157.033.0273.037.0
0294.031.0365.010.0
03306.036.0144.014.0
04453.01.027.019.0
0598.093.0286.023.0
06224.071.0198.07.0
07439.07.051.03.0
080.03.0489.08.0
096.01.0493.00.0
10496.03.00.01.0
11493.02.02.03.0
12103.022.0369.06.0
13223.048.0109.0120.0
14221.045.0174.060.0
15138.067.0251.044.0
16208.064.0164.064.0
17207.067.0154.072.0
PWM
ACGT
010.225-1.2980.774-1.189
02-0.281-1.3581.063-2.394
030.888-1.2150.14-2.096
041.279-3.903-1.489-1.818
05-0.24-0.2910.821-1.64
060.578-0.5560.455-2.694
071.247-2.694-0.879-3.325
08-4.4-3.3251.355-2.584
09-2.819-3.9031.363-4.4
101.369-3.325-4.4-3.903
111.363-3.573-3.573-3.325
12-0.191-1.6811.074-2.819
130.573-0.938-0.135-0.04
140.565-1.00.327-0.721
150.098-0.6130.691-1.022
160.504-0.6580.269-0.658
170.5-0.6130.206-0.543