Model info
Transcription factorElk1
ModelELK1_MOUSE.H11MO.0.B
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length11
Quality
B
Motif rank
0
ConsensusvSCGGAAGYdv
Best auROC (human)0.9753004380150154
Best auROC (mouse)0.7147245638224834
Peak sets in benchmark (human)4
Peak sets in benchmark (mouse)7
Aligned words501
TF familyEts-related factors{3.5.2}
TF subfamilyElk-like factors{3.5.2.2}
MGI101833
EntrezGene13712
UniProt IDELK1_MOUSE
UniProt ACP41969
Comment
Downloads pcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 3.59326
0.0005 4.5967
0.0001 6.634
GTEx tissue expression atlas Elk1 expression
ReMap ChIP-seq dataset list Elk1 datasets
Motifs in JASPAR
PCM
ACGT
01234.074.0138.054.0
0257.0368.073.02.0
0371.0405.03.021.0
041.00.0496.03.0
051.00.0499.00.0
06496.03.00.01.0
07490.01.01.08.0
0842.020.0411.027.0
0917.085.024.0374.0
1078.060.0291.071.0
11141.0117.0197.045.0
PWM
ACGT
010.621-0.5160.098-0.823
02-0.7711.072-0.529-3.573
03-0.5561.167-3.325-1.725
04-3.903-4.41.369-3.325
05-3.903-4.41.375-4.4
061.369-3.325-4.4-3.903
071.357-3.903-3.903-2.584
08-1.067-1.771.182-1.489
09-1.92-0.38-1.61.088
10-0.464-0.7210.838-0.556
110.119-0.0650.45-1.0