Model info
Transcription factorElk1
ModelELK1_MOUSE.H11MO.0.B
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length11
Quality
B
Motif rank
0
ConsensusvSCGGAAGYdv
Best auROC (human)0.975
Best auROC (mouse)0.715
Peak sets in benchmark (human)4
Peak sets in benchmark (mouse)7
Aligned words501
TF familyEts-related factors {3.5.2}
TF subfamilyElk-like factors {3.5.2.2}
MGIMGI:101833
EntrezGeneGeneID:13712
(SSTAR profile)
UniProt IDELK1_MOUSE
UniProt ACP41969
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 3.5995099999999995
0.0005 4.595185000000001
0.0001 6.635365
GTEx tissue expression atlas Elk1 expression
Motifs in JASPAR
PCM
ACGT
01234.074.0138.054.0
0257.0368.073.02.0
0371.0405.03.021.0
041.00.0496.03.0
051.00.0499.00.0
06496.03.00.01.0
07490.01.01.08.0
0842.020.0411.027.0
0917.085.024.0374.0
1078.060.0291.071.0
11141.0117.0197.045.0
PWM
ACGT
010.621-0.5160.098-0.823
02-0.7711.072-0.529-3.573
03-0.5561.167-3.325-1.725
04-3.903-4.41.369-3.325
05-3.903-4.41.375-4.4
061.369-3.325-4.4-3.903
071.357-3.903-3.903-2.584
08-1.067-1.771.182-1.489
09-1.92-0.38-1.61.088
10-0.464-0.7210.838-0.556
110.119-0.0650.45-1.0