Transcription factor | Foxl2 | ||||||||
Model | FOXL2_MOUSE.H11DI.0.C | ||||||||
Model type | Dinucleotide PWM | ||||||||
LOGO | |||||||||
LOGO (reverse complement) | |||||||||
Data source | ChIP-Seq | ||||||||
Model release | HOCOMOCOv11 | ||||||||
Model length | 14 | ||||||||
Quality | C | ||||||||
Motif rank | 0 | ||||||||
Consensus | nbnTGTTTWYhhWn | ||||||||
Best auROC (human) | |||||||||
Best auROC (mouse) | 0.943 | ||||||||
Peak sets in benchmark (human) | |||||||||
Peak sets in benchmark (mouse) | 2 | ||||||||
Aligned words | 500 | ||||||||
TF family | Forkhead box (FOX) factors {3.3.1} | ||||||||
TF subfamily | FOXL {3.3.1.12} | ||||||||
MGI | MGI:1349428 | ||||||||
EntrezGene | GeneID:26927 (SSTAR profile) | ||||||||
UniProt ID | FOXL2_MOUSE | ||||||||
UniProt AC | O88470 (TFClass) | ||||||||
Comment | |||||||||
Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
Standard thresholds |
| ||||||||
GTEx tissue expression atlas | Foxl2 expression | ||||||||
Motifs in JASPAR |
AA | AC | AG | AT | CA | CC | CG | CT | GA | GC | GG | GT | TA | TC | TG | TT | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
01 | 13.0 | 28.0 | 52.0 | 9.0 | 19.0 | 61.0 | 9.0 | 37.0 | 10.0 | 56.0 | 49.0 | 17.0 | 10.0 | 62.0 | 39.0 | 29.0 |
02 | 3.0 | 17.0 | 25.0 | 7.0 | 73.0 | 40.0 | 19.0 | 75.0 | 54.0 | 40.0 | 32.0 | 23.0 | 3.0 | 20.0 | 62.0 | 7.0 |
03 | 2.0 | 0.0 | 2.0 | 129.0 | 2.0 | 1.0 | 0.0 | 114.0 | 1.0 | 2.0 | 0.0 | 135.0 | 3.0 | 0.0 | 3.0 | 106.0 |
04 | 0.0 | 0.0 | 8.0 | 0.0 | 0.0 | 0.0 | 3.0 | 0.0 | 0.0 | 0.0 | 5.0 | 0.0 | 39.0 | 2.0 | 441.0 | 2.0 |
05 | 0.0 | 0.0 | 0.0 | 39.0 | 0.0 | 0.0 | 0.0 | 2.0 | 1.0 | 2.0 | 0.0 | 454.0 | 0.0 | 0.0 | 0.0 | 2.0 |
06 | 0.0 | 0.0 | 0.0 | 1.0 | 0.0 | 0.0 | 0.0 | 2.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 3.0 | 0.0 | 494.0 |
07 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 3.0 | 0.0 | 0.0 | 0.0 | 0.0 | 1.0 | 2.0 | 42.0 | 452.0 |
08 | 0.0 | 0.0 | 0.0 | 1.0 | 1.0 | 0.0 | 0.0 | 1.0 | 36.0 | 5.0 | 0.0 | 1.0 | 348.0 | 38.0 | 6.0 | 63.0 |
09 | 1.0 | 211.0 | 16.0 | 157.0 | 0.0 | 10.0 | 0.0 | 33.0 | 0.0 | 5.0 | 0.0 | 1.0 | 0.0 | 35.0 | 11.0 | 20.0 |
10 | 1.0 | 0.0 | 0.0 | 0.0 | 191.0 | 19.0 | 7.0 | 44.0 | 8.0 | 3.0 | 3.0 | 13.0 | 74.0 | 46.0 | 39.0 | 52.0 |
11 | 54.0 | 31.0 | 25.0 | 164.0 | 33.0 | 4.0 | 5.0 | 26.0 | 9.0 | 5.0 | 2.0 | 33.0 | 9.0 | 25.0 | 15.0 | 60.0 |
12 | 39.0 | 6.0 | 5.0 | 55.0 | 16.0 | 3.0 | 2.0 | 44.0 | 10.0 | 7.0 | 1.0 | 29.0 | 45.0 | 12.0 | 19.0 | 207.0 |
13 | 52.0 | 14.0 | 21.0 | 23.0 | 8.0 | 6.0 | 2.0 | 12.0 | 0.0 | 7.0 | 8.0 | 12.0 | 67.0 | 72.0 | 51.0 | 145.0 |
AA | AC | AG | AT | CA | CC | CG | CT | GA | GC | GG | GT | TA | TC | TG | TT | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
01 | -0.86 | -0.108 | 0.504 | -1.215 | -0.49 | 0.663 | -1.215 | 0.167 | -1.114 | 0.578 | 0.445 | -0.599 | -1.114 | 0.679 | 0.219 | -0.074 |
02 | -2.234 | -0.599 | -0.22 | -1.454 | 0.841 | 0.244 | -0.49 | 0.868 | 0.542 | 0.244 | 0.023 | -0.302 | -2.234 | -0.439 | 0.679 | -1.454 |
03 | -2.584 | -4.4 | -2.584 | 1.408 | -2.584 | -3.126 | -4.4 | 1.285 | -3.126 | -2.584 | -4.4 | 1.454 | -2.234 | -4.4 | -2.234 | 1.213 |
04 | -4.4 | -4.4 | -1.328 | -4.4 | -4.4 | -4.4 | -2.234 | -4.4 | -4.4 | -4.4 | -1.77 | -4.4 | 0.219 | -2.584 | 2.636 | -2.584 |
05 | -4.4 | -4.4 | -4.4 | 0.219 | -4.4 | -4.4 | -4.4 | -2.584 | -3.126 | -2.584 | -4.4 | 2.665 | -4.4 | -4.4 | -4.4 | -2.584 |
06 | -4.4 | -4.4 | -4.4 | -3.126 | -4.4 | -4.4 | -4.4 | -2.584 | -4.4 | -4.4 | -4.4 | -4.4 | -4.4 | -2.234 | -4.4 | 2.749 |
07 | -4.4 | -4.4 | -4.4 | -4.4 | -4.4 | -4.4 | -4.4 | -2.234 | -4.4 | -4.4 | -4.4 | -4.4 | -3.126 | -2.584 | 0.293 | 2.66 |
08 | -4.4 | -4.4 | -4.4 | -3.126 | -3.126 | -4.4 | -4.4 | -3.126 | 0.14 | -1.77 | -4.4 | -3.126 | 2.399 | 0.193 | -1.6 | 0.695 |
09 | -3.126 | 1.899 | -0.658 | 1.604 | -4.4 | -1.114 | -4.4 | 0.054 | -4.4 | -1.77 | -4.4 | -3.126 | -4.4 | 0.112 | -1.022 | -0.439 |
10 | -3.126 | -4.4 | -4.4 | -4.4 | 1.8 | -0.49 | -1.454 | 0.339 | -1.328 | -2.234 | -2.234 | -0.86 | 0.855 | 0.383 | 0.219 | 0.504 |
11 | 0.542 | -0.008 | -0.22 | 1.648 | 0.054 | -1.975 | -1.77 | -0.181 | -1.215 | -1.77 | -2.584 | 0.054 | -1.215 | -0.22 | -0.721 | 0.646 |
12 | 0.219 | -1.6 | -1.77 | 0.56 | -0.658 | -2.234 | -2.584 | 0.339 | -1.114 | -1.454 | -3.126 | -0.074 | 0.361 | -0.938 | -0.49 | 1.88 |
13 | 0.504 | -0.788 | -0.392 | -0.302 | -1.328 | -1.6 | -2.584 | -0.938 | -4.4 | -1.454 | -1.328 | -0.938 | 0.756 | 0.828 | 0.485 | 1.525 |