Model info
Transcription factorGATA2
ModelGATA2_HUMAN.H11DI.0.A
Model typeDinucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv10
Model length23
Quality
A
Motif rank
0
ConsensusnnnnnnnnnnnnvvWGATAASvn
Best auROC (human)0.9760663978852953
Best auROC (mouse)0.9778890707866157
Peak sets in benchmark (human)84
Peak sets in benchmark (mouse)54
Aligned words501
TF familyGATA-type zinc fingers{2.2.1}
TF subfamilyTwo zinc-finger GATA factors{2.2.1.1}
HGNC4171
EntrezGene2624
UniProt IDGATA2_HUMAN
UniProt ACP23769
Comment
Downloads pcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 8.979960000000002
0.0005 11.33331
0.0001 15.49361
GTEx tissue expression atlas GATA2 expression
ReMap ChIP-seq dataset list GATA2 datasets
Motifs in JASPAR
PCM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
0144.40622.66973.70410.1571.79323.5223.82741.30321.71740.81538.13128.24111.44310.92142.30915.049
0243.75721.2669.19615.14648.78617.7999.07122.2741.15450.21643.95522.6467.62624.29143.76919.058
0321.30622.18275.97721.85834.39533.2417.24938.68163.95951.12126.60724.3045.23923.13629.52721.218
0419.80615.83643.45345.80428.70121.8518.06171.06668.97714.66527.7627.95711.5817.26860.92516.288
0515.71425.4735.89651.98511.7988.8854.27244.66634.69535.25327.46242.7914.11626.241104.23116.528
0616.19511.13930.86618.12334.26227.8366.70427.04635.04150.43447.72938.65713.95916.91107.79817.301
0713.8916.64250.99717.92744.2524.6327.65529.78149.5239.18265.42538.979.1115.82354.90721.289
0817.2719.29348.67231.53535.60229.6255.82125.23251.08354.38342.11131.40722.02113.67450.46821.804
0915.81829.83551.71828.60428.12334.9072.91751.02738.15631.80250.86126.25312.34134.72152.49210.424
1020.99620.26141.76511.41735.92148.46311.735.18251.25829.1347.56130.03912.8636.27143.89423.283
1127.56931.42143.13618.90838.75130.3189.26255.79524.27433.79552.9833.8710.55220.0340.11229.228
1214.34214.2457.72514.83864.53621.5999.18920.2439.61222.30558.46725.10630.36625.39272.1439.899
1316.99455.8865.75810.22524.84635.1187.815.77130.38679.08766.27521.7785.29631.65621.95611.174
1462.090.9552.84711.62995.5054.8252.75498.657120.7027.340.98432.76340.5811.0961.19516.075
150.00.923317.0570.8990.00.014.2170.00.00.07.7790.00.00.0159.1250.0
160.00.00.00.00.9230.00.00.0496.2740.01.0250.880.8990.00.00.0
170.07.0565.256485.7840.00.00.00.00.00.00.01.0250.00.00.00.88
180.00.00.00.06.1270.00.00.9295.2560.00.00.0476.5520.881.948.316
19411.5515.56254.05316.7690.00.00.00.881.940.00.00.09.2450.00.00.0
2048.588113.82235.4524.8782.7030.9110.9880.964.90222.55223.6052.9930.01.17514.6061.867
2116.5558.65429.9011.08288.72626.00312.8910.84108.53248.36697.79719.9545.016.84616.9751.867
2261.14929.9667.4560.26452.02216.3414.89516.61254.41641.9444.03717.1728.00810.07613.821.84
PWM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
010.348-0.3160.851-1.0990.825-0.28-2.0160.276-0.3590.2640.197-0.1-0.984-1.0290.3-0.718
020.333-0.3790.788-0.7110.441-0.554-1.207-0.3340.2720.470.338-0.317-1.373-0.2480.333-0.487
03-0.377-0.3380.881-0.3520.0950.061-1.4210.2110.710.487-0.159-0.248-1.727-0.296-0.056-0.381
04-0.449-0.6680.3260.378-0.084-0.352-1.320.8150.785-0.743-0.117-0.11-0.972-0.5830.662-0.64
05-0.675-0.2020.1370.504-0.954-1.227-1.9150.3530.1030.119-0.1280.311-0.78-0.1721.196-0.626
06-0.646-1.01-0.012-0.5360.091-0.114-1.495-0.1430.1130.4740.4190.21-0.791-0.6041.229-0.581
07-0.796-0.6190.485-0.5470.344-0.235-1.37-0.0480.4560.2240.7320.218-1.203-0.6690.558-0.378
08-0.583-0.4750.4390.0090.129-0.053-1.628-0.2110.4870.5490.2950.005-0.345-0.8110.475-0.355
09-0.669-0.0460.499-0.087-0.1040.109-2.2590.4860.1970.0170.482-0.172-0.910.1040.514-1.074
10-0.392-0.4270.287-0.9860.1380.434-0.9620.1170.49-0.0690.416-0.039-0.8710.1470.336-0.29
11-0.1240.0050.319-0.4940.213-0.03-1.1870.574-0.2490.0770.5230.08-1.062-0.4380.247-0.066
12-0.764-0.7710.608-0.7310.719-0.364-1.195-0.4280.235-0.3320.621-0.216-0.028-0.2050.83-1.123
13-0.5990.5760.737-1.092-0.2260.115-1.352-0.672-0.0280.9210.745-0.356-1.7170.013-0.348-1.007
140.68-3.159-2.28-0.9681.109-1.803-2.311.1411.342-1.409-3.1380.0470.258-3.059-2.995-0.653
15-4.4-3.1832.306-3.202-4.4-4.4-0.773-4.4-4.4-4.4-1.354-4.4-4.4-4.41.618-4.4
16-4.4-4.4-4.4-4.4-3.183-4.4-4.4-4.42.754-4.4-3.109-3.217-3.202-4.4-4.4-4.4
17-4.4-1.447-1.7242.732-4.4-4.4-4.4-4.4-4.4-4.4-4.4-3.109-4.4-4.4-4.4-3.217
18-4.4-4.4-4.4-4.4-1.58-4.4-4.4-3.179-1.724-4.4-4.4-4.42.713-3.217-2.609-1.291
192.567-1.6710.543-0.612-4.4-4.4-4.4-3.217-2.609-4.4-4.4-4.4-1.189-4.4-4.4-4.4
200.4371.2842.009-0.225-2.326-3.192-3.135-3.155-1.788-0.321-0.277-2.236-4.4-3.007-0.747-2.641
21-0.624-1.252-0.044-3.0691.036-0.181-0.868-1.0361.2360.4321.132-0.442-1.768-1.476-0.6-2.641
220.665-0.0420.7630.6510.505-0.637-1.79-0.6210.5490.2910.339-0.589-1.327-1.106-0.801-2.653