Model info
Transcription factorGata2
ModelGATA2_MOUSE.H11DI.0.A
Model typeDinucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length22
Quality
A
Motif rank
0
ConsensusnvnnndnnnnnvWGATARvvdn
Best auROC (human)0.9663418536830674
Best auROC (mouse)0.9662900634652782
Peak sets in benchmark (human)84
Peak sets in benchmark (mouse)54
Aligned words501
TF familyGATA-type zinc fingers{2.2.1}
TF subfamilyTwo zinc-finger GATA factors{2.2.1.1}
MGI95662
EntrezGene14461
UniProt IDGATA2_MOUSE
UniProt ACO09100
Comment
Downloads pcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 10.10051
0.0005 12.08211
0.0001 15.50711
GTEx tissue expression atlas Gata2 expression
Motifs in JASPAR
PCM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
0113.022.0105.08.042.024.013.026.081.032.026.020.020.011.049.08.0
0225.025.042.064.028.015.05.041.0118.027.028.020.06.010.032.014.0
0323.014.038.0102.022.018.02.035.053.019.017.018.014.038.066.021.0
0420.09.054.029.028.018.017.026.046.029.029.019.017.034.095.030.0
0523.013.049.026.026.017.09.038.085.022.065.023.011.015.055.023.0
068.019.049.069.018.020.02.027.067.052.030.029.011.030.054.015.0
0719.08.031.046.039.032.08.042.034.037.048.016.010.039.060.031.0
0822.023.038.019.043.032.015.026.039.029.057.022.019.035.059.022.0
0922.042.044.015.045.033.011.030.033.050.053.033.010.024.029.026.0
1021.017.059.013.073.032.010.034.027.035.057.018.018.017.052.017.0
1128.043.058.010.032.036.014.019.027.061.071.019.05.037.035.05.0
1265.06.01.020.099.05.00.073.0132.04.03.039.031.01.02.019.0
130.00.0327.00.00.00.016.00.00.00.06.00.00.00.0151.00.0
140.00.00.00.00.00.00.00.0500.00.00.00.00.00.00.00.0
150.05.00.0495.00.00.00.00.00.00.00.00.00.00.00.00.0
160.00.00.00.05.00.00.00.00.00.00.00.0446.07.03.039.0
17305.026.093.027.05.00.02.00.00.01.02.00.030.00.05.04.0
1865.085.0177.013.05.013.03.06.05.050.036.011.03.03.021.04.0
1925.014.035.04.081.031.020.019.076.054.089.018.04.04.024.02.0
2063.022.057.044.052.022.07.022.070.031.044.023.014.04.018.07.0
2129.023.045.0102.030.024.03.022.037.032.035.022.07.053.020.016.0
PWM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
01-0.86-0.3461.203-1.3280.293-0.26-0.86-0.1810.9450.023-0.181-0.439-0.439-1.0220.445-1.328
02-0.22-0.220.2930.711-0.108-0.721-1.770.2691.32-0.144-0.108-0.439-1.6-1.1140.023-0.788
03-0.302-0.7880.1931.174-0.346-0.543-2.5840.1120.523-0.49-0.599-0.543-0.7880.1930.741-0.392
04-0.439-1.2150.542-0.074-0.108-0.543-0.599-0.1810.383-0.074-0.074-0.49-0.5990.0831.104-0.04
05-0.302-0.860.445-0.181-0.181-0.599-1.2150.1930.993-0.3460.726-0.302-1.022-0.7210.56-0.302
06-1.328-0.490.4450.785-0.543-0.439-2.584-0.1440.7560.504-0.04-0.074-1.022-0.040.542-0.721
07-0.49-1.328-0.0080.3830.2190.023-1.3280.2930.0830.1670.425-0.658-1.1140.2190.646-0.008
08-0.346-0.3020.193-0.490.3160.023-0.721-0.1810.219-0.0740.595-0.346-0.490.1120.63-0.346
09-0.3460.2930.339-0.7210.3610.054-1.022-0.040.0540.4650.5230.054-1.114-0.26-0.074-0.181
10-0.392-0.5990.63-0.860.8410.023-1.1140.083-0.1440.1120.595-0.543-0.543-0.5990.504-0.599
11-0.1080.3160.613-1.1140.0230.14-0.788-0.49-0.1440.6630.814-0.49-1.770.1670.112-1.77
120.726-1.6-3.126-0.4391.145-1.77-4.40.8411.431-1.975-2.2340.219-0.008-3.126-2.584-0.49
13-4.4-4.42.337-4.4-4.4-4.4-0.658-4.4-4.4-4.4-1.6-4.4-4.4-4.41.565-4.4
14-4.4-4.4-4.4-4.4-4.4-4.4-4.4-4.42.761-4.4-4.4-4.4-4.4-4.4-4.4-4.4
15-4.4-1.77-4.42.751-4.4-4.4-4.4-4.4-4.4-4.4-4.4-4.4-4.4-4.4-4.4-4.4
16-4.4-4.4-4.4-4.4-1.77-4.4-4.4-4.4-4.4-4.4-4.4-4.42.647-1.454-2.2340.219
172.267-0.1811.082-0.144-1.77-4.4-2.584-4.4-4.4-3.126-2.584-4.4-0.04-4.4-1.77-1.975
180.7260.9931.724-0.86-1.77-0.86-2.234-1.6-1.770.4650.14-1.022-2.234-2.234-0.392-1.975
19-0.22-0.7880.112-1.9750.945-0.008-0.439-0.490.8810.5421.039-0.543-1.975-1.975-0.26-2.584
200.695-0.3460.5950.3390.504-0.346-1.454-0.3460.8-0.0080.339-0.302-0.788-1.975-0.543-1.454
21-0.074-0.3020.3611.174-0.04-0.26-2.234-0.3460.1670.0230.112-0.346-1.4540.523-0.439-0.658