Model info
Transcription factorGata4
ModelGATA4_MOUSE.H11MO.0.A
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length10
Quality
A
Motif rank
0
ConsensusdvWGATAASR
Best auROC (human)0.9546621184555543
Best auROC (mouse)0.939585335370212
Peak sets in benchmark (human)15
Peak sets in benchmark (mouse)17
Aligned words500
TF familyGATA-type zinc fingers{2.2.1}
TF subfamilyTwo zinc-finger GATA factors{2.2.1.1}
MGI95664
EntrezGene14463
UniProt IDGATA4_MOUSE
UniProt ACQ08369
Comment
Downloads pcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 5.08642
0.0005 6.02546
0.0001 8.10149
GTEx tissue expression atlas Gata4 expression
ReMap ChIP-seq dataset list Gata4 datasets
Motifs in JASPAR
PCM
ACGT
01184.064.0156.096.0
0294.0215.0142.049.0
03332.04.08.0156.0
042.00.0498.00.0
05490.02.04.04.0
064.011.020.0465.0
07481.02.02.015.0
08459.01.035.05.0
0947.091.0349.013.0
10285.071.0128.016.0
PWM
ACGT
010.383-0.6580.219-0.26
02-0.2810.5370.126-0.918
030.969-3.126-2.5840.219
04-3.573-4.41.373-4.4
051.357-3.573-3.126-3.126
06-3.126-2.311-1.771.305
071.338-3.573-3.573-2.034
081.292-3.903-1.242-2.961
09-0.958-0.3131.019-2.163
100.817-0.5560.023-1.975