Model info
Transcription factorGata4
ModelGATA4_MOUSE.H11MO.0.A
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length10
Quality
A
Motif rank
0
ConsensusdvWGATAASR
Best auROC (human)0.9546621184555543
Best auROC (mouse)0.939585335370212
Peak sets in benchmark (human)15
Peak sets in benchmark (mouse)17
Aligned words500
TF familyGATA-type zinc fingers{2.2.1}
TF subfamilyTwo zinc-finger GATA factors{2.2.1.1}
MGI95664
EntrezGene14463
UniProt IDGATA4_MOUSE
UniProt ACQ08369
Comment
Downloads pcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 5.087975
0.0005 6.017754999999999
0.0001 8.092935
GTEx tissue expression atlas Gata4 expression
Motifs in JASPAR
PCM
ACGT
01184.064.0156.096.0
0294.0215.0142.049.0
03332.04.08.0156.0
042.00.0498.00.0
05490.02.04.04.0
064.011.020.0465.0
07481.02.02.015.0
08459.01.035.05.0
0947.091.0349.013.0
10285.071.0128.016.0
PWM
ACGT
010.383-0.6580.219-0.26
02-0.2810.5370.126-0.918
030.969-3.126-2.5840.219
04-3.573-4.41.373-4.4
051.357-3.573-3.126-3.126
06-3.126-2.311-1.771.305
071.338-3.573-3.573-2.034
081.292-3.903-1.242-2.961
09-0.958-0.3131.019-2.163
100.817-0.5560.023-1.975