Model info
Transcription factorNR3C1
ModelGCR_HUMAN.H11DI.0.A
Model typeDinucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length19
Quality
A
Motif rank
0
ConsensusdvhnRGdACAbnvhGKnMh
Best auROC (human)0.9852826327306812
Best auROC (mouse)0.9916063260401542
Peak sets in benchmark (human)143
Peak sets in benchmark (mouse)119
Aligned words466
TF familySteroid hormone receptors (NR3){2.1.1}
TF subfamilyGR-like receptors (NR3C){2.1.1.1}
HGNC7978
EntrezGene2908
UniProt IDGCR_HUMAN
UniProt ACP04150
Comment
Downloads pcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 9.358260000000001
0.0005 11.04101
0.0001 14.47211
GTEx tissue expression atlas NR3C1 expression
ReMap ChIP-seq dataset list NR3C1 datasets
Motifs in JASPAR
PCM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
0117.036.033.013.023.039.05.014.037.069.047.027.04.036.022.020.0
0235.027.012.07.077.060.03.040.041.036.021.09.019.021.021.013.0
0331.063.064.014.054.039.09.042.021.016.09.011.011.026.024.08.0
0438.03.074.02.098.01.021.024.040.02.057.07.015.01.056.03.0
059.01.0177.04.02.00.03.02.013.01.0186.08.00.00.035.01.0
0610.03.08.03.01.00.00.01.0205.045.0102.049.03.04.01.07.0
07201.00.016.02.050.02.00.00.0105.02.03.01.054.00.03.03.0
080.0387.013.010.00.04.00.00.01.021.00.00.00.06.00.00.0
090.01.00.00.0362.06.019.031.08.00.02.03.03.01.06.00.0
1065.076.0155.077.01.01.01.05.00.06.014.07.01.09.014.010.0
1128.08.025.06.032.023.013.024.058.047.052.027.018.032.024.025.0
1262.037.028.09.045.041.013.011.038.033.034.09.07.045.020.010.0
1321.070.010.051.047.029.01.079.031.019.012.033.06.09.01.023.0
145.04.095.01.047.010.068.02.03.02.018.01.07.07.0171.01.0
158.05.016.033.02.02.02.017.039.039.041.0233.01.01.03.00.0
1611.08.017.014.014.06.02.025.024.015.07.016.052.090.056.085.0
1721.066.07.07.014.094.02.09.018.041.06.017.017.095.013.015.0
1816.018.09.027.051.088.07.0150.03.010.07.08.04.011.016.017.0
PWM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
01-0.4770.2620.176-0.739-0.180.341-1.65-0.6670.2890.9070.526-0.023-1.8550.262-0.224-0.318
020.234-0.023-0.816-1.3341.0160.768-2.1140.3660.390.262-0.27-1.094-0.368-0.27-0.27-0.739
030.1140.8170.832-0.6670.6640.341-1.0940.414-0.27-0.536-1.094-0.9-0.9-0.06-0.139-1.206
040.315-2.1140.977-2.4651.256-3.01-0.27-0.1390.366-2.4650.717-1.334-0.599-3.010.7-2.114
05-1.094-3.011.846-1.855-2.465-4.298-2.114-2.465-0.739-3.011.895-1.206-4.298-4.2980.234-3.01
06-0.992-2.114-1.206-2.114-3.01-4.298-4.298-3.011.9920.4831.2960.567-2.114-1.855-3.01-1.334
071.973-4.298-0.536-2.4650.587-2.465-4.298-4.2981.325-2.465-2.114-3.010.664-4.298-2.114-2.114
08-4.2982.627-0.739-0.992-4.298-1.855-4.298-4.298-3.01-0.27-4.298-4.298-4.298-1.479-4.298-4.298
09-4.298-3.01-4.298-4.2982.56-1.479-0.3680.114-1.206-4.298-2.465-2.114-2.114-3.01-1.479-4.298
100.8481.0031.7131.016-3.01-3.01-3.01-1.65-4.298-1.479-0.667-1.334-3.01-1.094-0.667-0.992
110.013-1.206-0.098-1.4790.145-0.18-0.739-0.1390.7350.5260.626-0.023-0.4210.145-0.139-0.098
120.8010.2890.013-1.0940.4830.39-0.739-0.90.3150.1760.205-1.094-1.3340.483-0.318-0.992
13-0.270.922-0.9920.6070.5260.048-3.011.0420.114-0.368-0.8160.176-1.479-1.094-3.01-0.18
14-1.65-1.8551.225-3.010.526-0.9920.893-2.465-2.114-2.465-0.421-3.01-1.334-1.3341.811-3.01
15-1.206-1.65-0.5360.176-2.465-2.465-2.465-0.4770.3410.3410.392.12-3.01-3.01-2.114-4.298
16-0.9-1.206-0.477-0.667-0.667-1.479-2.465-0.098-0.139-0.599-1.334-0.5360.6261.1720.71.115
17-0.270.863-1.334-1.334-0.6671.215-2.465-1.094-0.4210.39-1.479-0.477-0.4771.225-0.739-0.599
18-0.536-0.421-1.094-0.0230.6071.149-1.3341.681-2.114-0.992-1.334-1.206-1.855-0.9-0.536-0.477