Model info
Transcription factorGfi1
ModelGFI1_MOUSE.H11MO.0.C
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceIntegrative
Model releaseHOCOMOCOv9
Model length10
Quality
C
Motif rank
0
ConsensusRShSWGATTb
Best auROC (human)
Best auROC (mouse)
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)
Aligned words152
TF familyMore than 3 adjacent zinc finger factors {2.3.3}
TF subfamilyGFI1 factors {2.3.3.21}
MGIMGI:103170
EntrezGeneGeneID:14581
(SSTAR profile)
UniProt IDGFI1_MOUSE
UniProt ACP70338
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 5.51908
0.0005 6.42712
0.0001 8.005635
GTEx tissue expression atlas Gfi1 expression
Motifs in JASPAR
PCM
ACGT
0143.58510.39587.8657.692
0211.626102.36620.83314.711
0360.5915.01111.31262.624
047.77842.69584.20914.855
0535.7712.53911.95899.269
060.00.0149.5370.0
07149.5370.00.00.0
080.00.00.0149.537
090.00.00.0149.537
1015.47717.65528.53587.869
PWM
ACGT
010.149-1.1990.836-1.463
02-1.0990.987-0.559-0.884
030.47-0.865-1.1230.503
04-1.4540.1290.794-0.875
05-0.043-2.322-1.0730.956
06-3.43-3.431.362-3.43
071.362-3.43-3.43-3.43
08-3.43-3.43-3.431.362
09-3.43-3.43-3.431.362
10-0.837-0.715-0.260.836