Model info
Transcription factorGLI2
ModelGLI2_HUMAN.H11MO.0.D
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceIntegrative
Model releaseHOCOMOCOv9
Model length11
Quality
D
Motif rank
0
ConsensusSTGGGTGGTCb
Best auROC (human)
Best auROC (mouse)
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)
Aligned words970
TF familyMore than 3 adjacent zinc finger factors{2.3.3}
TF subfamilyGLI-like factors{2.3.3.1}
HGNC4318
EntrezGene2736
UniProt IDGLI2_HUMAN
UniProt ACP10070
Comment
Downloads pcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 -1.81855
0.0005 -0.51616
0.0001 4.10001
GTEx tissue expression atlas GLI2 expression
ReMap ChIP-seq dataset list GLI2 datasets
Motifs in JASPAR
PCM
ACGT
01105.231162.836574.35188.095
020.00.00.0930.513
030.00.0930.5130.0
040.00.0786.124144.389
050.00.0930.5130.0
060.00.00.0930.513
070.00.0930.5130.0
080.00.0930.5130.0
090.00.00.0930.513
100.0930.5130.00.0
1174.325343.71486.807425.667
PWM
ACGT
01-0.784-0.3540.899-0.959
02-4.921-4.921-4.9211.381
03-4.921-4.9211.381-4.921
04-4.921-4.9211.213-0.472
05-4.921-4.9211.381-4.921
06-4.921-4.921-4.9211.381
07-4.921-4.9211.381-4.921
08-4.921-4.9211.381-4.921
09-4.921-4.921-4.9211.381
10-4.9211.381-4.921-4.921
11-1.1260.388-0.9740.601