Model info
Transcription factorGLIS1
ModelGLIS1_HUMAN.H11MO.0.D
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceHT-SELEX
Model releaseHOCOMOCOv10
Model length13
Quality
D
Motif rank
0
ConsensushYGYGGGGGGTMd
Best auROC (human)
Best auROC (mouse)
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)
Aligned words492
TF familyMore than 3 adjacent zinc finger factors{2.3.3}
TF subfamilyGLI-like factors{2.3.3.1}
HGNC29525
EntrezGene148979
UniProt IDGLIS1_HUMAN
UniProt ACQ8NBF1
Comment
Downloads pcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 2.88201
0.0005 3.95471
0.0001 6.12532
GTEx tissue expression atlas GLIS1 expression
ReMap ChIP-seq dataset list GLIS1 datasets
Motifs in JASPAR
PCM
ACGT
0191.590.558.5251.5
0253.25310.2546.2582.25
0329.520.5418.523.5
0421.7593.7520.75355.75
0515.2513.25446.2517.25
0615.2515.25449.2512.25
076.256.25455.2524.25
0818.259.25448.2516.25
097.09.0467.09.0
108.758.75464.759.75
1110.07.021.0454.0
12148.75275.7542.7524.75
13103.2553.25154.25181.25
PWM
ACGT
01-0.292-0.302-0.730.709
02-0.8210.918-0.958-0.396
03-1.389-1.7311.216-1.604
04-1.676-0.268-1.721.054
05-2.003-2.131.28-1.891
06-2.003-2.0031.286-2.2
07-2.771-2.7711.3-1.574
08-1.839-2.4451.284-1.946
09-2.679-2.4691.325-2.469
10-2.493-2.4931.32-2.4
11-2.378-2.679-1.7091.297
120.1880.8-1.034-1.555
13-0.173-0.8210.2240.384