Model info
Transcription factorGRHL2
ModelGRHL2_HUMAN.H11MO.0.A
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length12
Quality
A
Motif rank
0
ConsensusRWCYdGTYbddC
Best auROC (human)0.9597828603098488
Best auROC (mouse)0.9207904883986111
Peak sets in benchmark (human)22
Peak sets in benchmark (mouse)4
Aligned words497
TF familyGrainyhead-related factors{6.7.1}
TF subfamilyGRH-like proteins{6.7.1.1}
HGNC2799
EntrezGene79977
UniProt IDGRHL2_HUMAN
UniProt ACQ6ISB3
Comment
Downloads pcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 4.54081
0.0005 5.53284
0.0001 7.46958
PCM
ACGT
01368.014.064.051.0
02387.08.044.058.0
030.0496.01.00.0
0422.0355.04.0116.0
05112.017.0153.0215.0
062.01.0494.00.0
0712.0126.02.0357.0
087.0192.05.0293.0
0961.0119.071.0246.0
1088.028.0230.0151.0
11174.032.0167.0124.0
121.0454.014.028.0
PWM
ACGT
011.078-2.091-0.652-0.873
021.128-2.578-1.016-0.748
03-4.3951.375-3.898-4.395
04-1.6751.042-3.121-0.068
05-0.102-1.9140.2060.543
06-3.567-3.8981.371-4.395
07-2.2280.014-3.5671.047
08-2.6890.431-2.9550.851
09-0.699-0.043-0.550.677
10-0.34-1.4490.610.193
110.333-1.3220.293-0.002
12-3.8981.287-2.091-1.449