Model info
Transcription factorNHLH1
ModelHEN1_HUMAN.H11MO.0.C
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceIntegrative
Model releaseHOCOMOCOv9
Model length20
Quality
C
Motif rank
0
ConsensusbKGGnMbCAGCTGCGKCYhh
Best auROC (human)
Best auROC (mouse)
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)
Aligned words55
TF familyTal-related factors{1.2.3}
TF subfamilyTal / HEN-like factors{1.2.3.1}
HGNC7817
EntrezGene4807
UniProt IDHEN1_HUMAN
UniProt ACQ02575
Comment
Downloads pcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 1.80321
0.0005 2.95401
0.0001 5.36551
PCM
ACGT
016.58612.66516.13819.611
026.0785.2135.0298.683
031.7371.73742.8438.683
045.210.047.1852.605
056.9476.94725.47715.63
0627.21425.1812.6050.0
076.9477.81524.31315.925
082.60550.6581.7370.0
0953.2630.8680.8680.0
100.04.34248.0532.605
110.055.00.00.0
123.4730.00.051.527
130.00.054.1320.868
140.86848.9223.4731.737
152.6050.86845.4486.078
160.012.15715.6327.214
170.86848.9223.4731.737
185.2138.5024.3426.947
196.07823.4455.2120.267
207.0221.7823.54722.65
PWM
ACGT
01-0.665-0.0760.150.335
02-0.734-0.8650.893-0.421
03-1.684-1.6841.089-0.421
04-0.865-2.691.184-1.409
05-0.618-0.6180.5850.12
060.6490.574-1.409-2.69
07-0.618-0.5150.540.138
08-1.4091.253-1.684-2.69
091.303-2.065-2.065-2.69
10-2.69-1.0151.202-1.409
11-2.691.334-2.69-2.69
12-1.193-2.69-2.691.27
13-2.69-2.691.318-2.065
14-2.0651.219-1.193-1.684
15-1.409-2.0651.147-0.734
16-2.69-0.1140.120.649
17-2.0651.219-1.193-1.684
18-0.8650.985-1.015-0.618
19-0.7340.505-0.8650.366
20-0.6090.435-1.1760.472