Model info
Transcription factorHesx1
ModelHESX1_MOUSE.H11MO.0.D
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceIntegrative
Model releaseHOCOMOCOv9
Model length16
Quality
D
Motif rank
0
ConsensusnKCYGRCWCnTRRnhY
Best auROC (human)
Best auROC (mouse)
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)
Aligned words8
TF familyPaired-related HD factors{3.1.3}
TF subfamilyHESX{3.1.3.10}
MGI96071
EntrezGene15209
UniProt IDHESX1_MOUSE
UniProt ACQ61658
Comment
Downloads pcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 4.590059999999999
0.0005 5.20151
0.0001 6.463509999999999
GTEx tissue expression atlas Hesx1 expression
Motifs in JASPAR
PCM
ACGT
013.5141.5711.4571.457
020.02.0572.8573.086
030.04.1143.8860.0
041.0294.1140.02.857
050.00.08.00.0
061.1430.05.8291.029
071.0296.9710.00.0
083.8861.0290.03.086
093.24.80.00.0
102.1711.0293.7711.029
110.00.9140.07.086
123.0860.03.7711.143
132.9710.9144.1140.0
142.1713.7711.0291.029
152.9713.0860.9141.029
160.2571.2861.1715.286
PWM
ACGT
010.471-0.186-0.243-0.243
02-1.5780.0220.2930.358
03-1.5780.6090.559-1.578
04-0.4870.609-1.5780.293
05-1.578-1.5781.218-1.578
06-0.416-1.5780.924-0.487
07-0.4871.09-1.578-1.578
080.559-0.487-1.5780.358
090.3890.747-1.578-1.578
100.066-0.4870.532-0.487
11-1.578-0.564-1.5781.105
120.358-1.5780.532-0.416
130.326-0.5640.609-1.578
140.0660.532-0.487-0.487
150.3260.358-0.564-0.487
16-1.177-0.333-0.3990.835