Model info
Transcription factorHIC2
ModelHIC2_HUMAN.H11MO.0.D
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceHT-SELEX
Model releaseHOCOMOCOv10
Model length11
Quality
D
Motif rank
0
ConsensusnhRTGCCAGnn
Best auROC (human)
Best auROC (mouse)
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)
Aligned words134
TF familyFactors with multiple dispersed zinc fingers{2.3.4}
TF subfamilyHypermethylated in Cancer proteins{2.3.4.17}
HGNC18595
EntrezGene23119
UniProt IDHIC2_HUMAN
UniProt ACQ96JB3
Comment
Downloads pcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 4.23191
0.0005 5.09167
0.0001 7.68194
GTEx tissue expression atlas HIC2 expression
ReMap ChIP-seq dataset list HIC2 datasets
Motifs in JASPAR
PCM
ACGT
0146.046.013.029.0
0227.563.512.530.5
0367.51.564.50.5
040.00.00.0134.0
050.00.0134.00.0
060.0134.00.00.0
070.0134.00.00.0
08105.029.00.00.0
096.7514.75111.750.75
1026.041.045.022.0
1133.038.030.033.0
PWM
ACGT
010.3070.307-0.892-0.139
02-0.190.623-0.928-0.09
030.683-2.5450.638-3.003
04-3.345-3.345-3.3451.359
05-3.345-3.3451.359-3.345
06-3.3451.359-3.345-3.345
07-3.3451.359-3.345-3.345
081.118-0.139-3.345-3.345
09-1.471-0.7761.18-2.867
10-0.2430.1960.286-0.402
11-0.0150.122-0.106-0.015