Model info
Transcription factorTcf12
ModelHTF4_MOUSE.H11MO.0.A
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length10
Quality
A
Motif rank
0
ConsensusdSCAGSTGKb
Best auROC (human)0.8968968161575869
Best auROC (mouse)0.9856909445077275
Peak sets in benchmark (human)49
Peak sets in benchmark (mouse)10
Aligned words501
TF familyE2A-related factors{1.2.1}
TF subfamilyHTF-4 (TCF-12, HEB){1.2.1.0.3}
MGI101877
EntrezGene21406
UniProt IDHTF4_MOUSE
UniProt ACQ61286
Comment
Downloads pcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 5.09774
0.0005 5.92731
0.0001 7.48573
GTEx tissue expression atlas Tcf12 expression
Motifs in JASPAR
PCM
ACGT
01205.028.0178.089.0
0278.085.0328.09.0
038.0418.068.06.0
04486.02.05.07.0
054.02.0489.05.0
0676.0120.0295.09.0
0756.07.022.0415.0
0822.012.0454.012.0
0948.030.0268.0154.0
1057.0110.0265.068.0
PWM
ACGT
010.49-1.4540.35-0.335
02-0.464-0.380.957-2.484
03-2.5841.199-0.599-2.819
041.349-3.573-2.961-2.694
05-3.126-3.5731.355-2.961
06-0.49-0.040.852-2.484
07-0.788-2.694-1.6811.191
08-1.681-2.2341.281-2.234
09-0.938-1.3890.7560.206
10-0.771-0.1260.745-0.599