Model info
Transcription factorTcf12
ModelHTF4_MOUSE.H11MO.0.A
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length10
Quality
A
Motif rank
0
ConsensusdSCAGSTGKb
Best auROC (human)0.897
Best auROC (mouse)0.986
Peak sets in benchmark (human)49
Peak sets in benchmark (mouse)10
Aligned words501
TF familyE2A-related factors {1.2.1}
TF subfamilyHTF-4 (TCF-12, HEB) {1.2.1.0.3}
MGIMGI:101877
EntrezGeneGeneID:21406
(SSTAR profile)
UniProt IDHTF4_MOUSE
UniProt ACQ61286
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 5.107279999999999
0.0005 5.9225900000000005
0.0001 7.478405
GTEx tissue expression atlas Tcf12 expression
Motifs in JASPAR
PCM
ACGT
01205.028.0178.089.0
0278.085.0328.09.0
038.0418.068.06.0
04486.02.05.07.0
054.02.0489.05.0
0676.0120.0295.09.0
0756.07.022.0415.0
0822.012.0454.012.0
0948.030.0268.0154.0
1057.0110.0265.068.0
PWM
ACGT
010.49-1.4540.35-0.335
02-0.464-0.380.957-2.484
03-2.5841.199-0.599-2.819
041.349-3.573-2.961-2.694
05-3.126-3.5731.355-2.961
06-0.49-0.040.852-2.484
07-0.788-2.694-1.6811.191
08-1.681-2.2341.281-2.234
09-0.938-1.3890.7560.206
10-0.771-0.1260.745-0.599