Model info
Transcription factorTcf12
ModelHTF4_MOUSE.H11MO.0.A
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length10
Quality
A
Motif rank
0
ConsensusdSCAGSTGKb
Best auROC (human)0.8968968161575869
Best auROC (mouse)0.9856909445077275
Peak sets in benchmark (human)49
Peak sets in benchmark (mouse)10
Aligned words501
TF familyE2A-related factors{1.2.1}
TF subfamilyHTF-4 (TCF-12, HEB){1.2.1.0.3}
MGI101877
EntrezGene21406
UniProt IDHTF4_MOUSE
UniProt ACQ61286
Comment
Downloads pcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 5.09774
0.0005 5.92731
0.0001 7.48573
GTEx tissue expression atlas Tcf12 expression
ReMap ChIP-seq dataset list Tcf12 datasets
Motifs in JASPAR
PCM
ACGT
01205.028.0178.089.0
0278.085.0328.09.0
038.0418.068.06.0
04486.02.05.07.0
054.02.0489.05.0
0676.0120.0295.09.0
0756.07.022.0415.0
0822.012.0454.012.0
0948.030.0268.0154.0
1057.0110.0265.068.0
PWM
ACGT
010.49-1.4540.35-0.335
02-0.464-0.380.957-2.484
03-2.5841.199-0.599-2.819
041.349-3.573-2.961-2.694
05-3.126-3.5731.355-2.961
06-0.49-0.040.852-2.484
07-0.788-2.694-1.6811.191
08-1.681-2.2341.281-2.234
09-0.938-1.3890.7560.206
10-0.771-0.1260.745-0.599