Model info
Transcription factorHOXB13
ModelHXB13_HUMAN.H11MO.0.A
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length10
Quality
A
Motif rank
0
ConsensusYTTTATdRvn
Best auROC (human)0.8458477791180562
Best auROC (mouse)
Peak sets in benchmark (human)9
Peak sets in benchmark (mouse)
Aligned words500
TF familyHOX-related factors{3.1.1}
TF subfamilyHOX9-13{3.1.1.8}
HGNC5112
EntrezGene10481
UniProt IDHXB13_HUMAN
UniProt ACQ92826
Comment
Downloads pcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 5.67642
0.0005 6.53543
0.0001 8.22077
PCM
ACGT
0134.054.050.0362.0
025.03.09.0483.0
030.02.01.0497.0
047.012.013.0468.0
05472.011.017.00.0
0612.050.01.0437.0
07131.05.0162.0202.0
08125.04.0328.043.0
0951.0165.0250.034.0
1096.0192.084.0128.0
PWM
ACGT
01-1.27-0.823-0.8981.055
02-2.961-3.325-2.4841.343
03-4.4-3.573-3.9031.371
04-2.694-2.234-2.1631.311
051.32-2.311-1.92-4.4
06-2.234-0.898-3.9031.243
070.046-2.9610.2560.475
080.0-3.1260.957-1.044
09-0.8790.2750.687-1.27
10-0.260.425-0.3920.023