Model info
Transcription factorHOXB3
ModelHXB3_HUMAN.H11MO.0.D
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceHT-SELEX
Model releaseHOCOMOCOv10
Model length14
Quality
D
Motif rank
0
ConsensushTAATKRbhhhWWh
Best auROC (human)
Best auROC (mouse)
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)
Aligned words3405
TF familyHOX-related factors{3.1.1}
TF subfamilyHOX3{3.1.1.3}
HGNC5114
EntrezGene3213
UniProt IDHXB3_HUMAN
UniProt ACP14651
Comment
Downloads pcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 5.90141
0.0005 6.72121
0.0001 8.33011
GTEx tissue expression atlas HOXB3 expression
ReMap ChIP-seq dataset list HOXB3 datasets
Motifs in JASPAR
PCM
ACGT
01401.751161.75374.751464.75
02203.5191.5156.52851.5
033007.25132.25141.25122.25
043399.50.52.50.5
050.020.019.03364.0
0618.0105.0945.02335.0
072339.048.0913.0103.0
08339.01281.01422.0361.0
09530.0957.0390.01526.0
10701.0536.0510.01656.0
11830.75446.75271.751853.75
12721.0328.0214.02140.0
13752.75315.75275.752058.75
141491.25523.25436.25952.25
PWM
ACGT
01-0.7480.311-0.8170.542
02-1.423-1.483-1.6831.208
031.261-1.849-1.784-1.926
041.383-5.819-5.237-5.819
05-6.039-3.656-3.7021.373
06-3.751-2.0750.1051.008
071.01-2.8360.07-2.094
08-0.9170.4080.513-0.854
09-0.4720.117-0.7770.583
10-0.193-0.461-0.510.665
11-0.024-0.642-1.1360.778
12-0.165-0.949-1.3730.921
13-0.122-0.987-1.1220.882
140.56-0.485-0.6660.112