Model info
Transcription factorHOXB6
ModelHXB6_HUMAN.H11MO.0.D
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceIntegrative
Model releaseHOCOMOCOv9
Model length13
Quality
D
Motif rank
0
ConsensusdWTGATTKATGCn
Best auROC (human)
Best auROC (mouse)
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)
Aligned words7
TF familyHOX-related factors{3.1.1}
TF subfamilyHOX6-7{3.1.1.6}
HGNC5117
EntrezGene3216
UniProt IDHXB6_HUMAN
UniProt ACP17509
Comment
Downloads pcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 5.58223
0.0005 6.33935
0.0001 7.91234
GTEx tissue expression atlas HOXB6 expression
ReMap ChIP-seq dataset list HOXB6 datasets
Motifs in JASPAR
PCM
ACGT
013.3170.6331.5721.478
023.4720.8450.02.683
030.00.8450.06.155
040.8450.06.1550.0
057.00.00.00.0
060.00.00.07.0
070.00.00.07.0
080.8450.03.5282.628
096.1550.00.8450.0
100.00.00.07.0
110.00.06.1550.845
123.4723.5280.00.0
133.5281.7830.8450.845
PWM
ACGT
010.531-0.692-0.083-0.13
020.571-0.519-1.5250.349
03-1.525-0.519-1.5251.088
04-0.519-1.5251.088-1.525
051.208-1.525-1.525-1.525
06-1.525-1.525-1.5251.208
07-1.525-1.525-1.5251.208
08-0.519-1.5250.5850.331
091.088-1.525-0.519-1.525
10-1.525-1.525-1.5251.208
11-1.525-1.5251.088-0.519
120.5710.585-1.525-1.525
130.5850.015-0.519-0.519