Model info
Transcription factorHoxb8
ModelHXB8_MOUSE.H11MO.0.C
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceIntegrative
Model releaseHOCOMOCOv9
Model length11
Quality
C
Motif rank
0
ConsensusTTGATTRATKv
Best auROC (human)
Best auROC (mouse)
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)
Aligned words26
TF familyHOX-related factors {3.1.1}
TF subfamilyHOX8 {3.1.1.7}
MGIMGI:96189
EntrezGeneGeneID:15416
(SSTAR profile)
UniProt IDHXB8_MOUSE
UniProt ACP09632
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 5.24784
0.0005 6.288349999999999
0.0001 7.923375
GTEx tissue expression atlas Hoxb8 expression
Motifs in JASPAR
PCM
ACGT
015.2250.2250.22520.725
020.01.00.025.4
032.00.024.40.0
0426.40.00.00.0
050.00.00.026.4
060.00.00.026.4
0714.70.06.75.0
0826.40.00.00.0
091.00.00.025.4
102.71.813.78.2
117.79.66.42.7
PWM
ACGT
01-0.205-1.962-1.9621.066
02-2.204-1.406-2.2041.263
03-0.968-2.2041.224-2.204
041.3-2.204-2.204-2.204
05-2.204-2.204-2.2041.3
06-2.204-2.204-2.2041.3
070.738-2.2040.013-0.243
081.3-2.204-2.204-2.204
09-1.406-2.204-2.2041.263
10-0.746-1.0410.6710.195
110.1380.34-0.027-0.746