Model info
Transcription factorHoxd10
ModelHXD10_MOUSE.H11MO.0.D
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceIntegrative
Model releaseHOCOMOCOv9
Model length10
Quality
D
Motif rank
0
ConsensusTGnTYTWRTK
Best auROC (human)
Best auROC (mouse)
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)
Aligned words7
TF familyHOX-related factors{3.1.1}
TF subfamilyHOX9-13{3.1.1.8}
MGI96202
EntrezGene15430
UniProt IDHXD10_MOUSE
UniProt ACP28359
Comment
Downloads pcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 5.58168
0.0005 6.0856
0.0001 7.17881
GTEx tissue expression atlas Hoxd10 expression
ReMap ChIP-seq dataset list Hoxd10 datasets
Motifs in JASPAR
PCM
ACGT
011.0750.2150.2155.495
021.720.05.280.0
030.863.5590.861.72
040.860.00.06.14
050.861.8390.04.301
060.00.00.07.0
074.4190.00.861.72
084.3010.01.8390.86
090.00.00.07.0
100.2150.2151.9364.634
PWM
ACGT
01-0.359-1.159-1.1590.984
02-0.013-1.5250.947-1.525
03-0.5070.593-0.507-0.013
04-0.507-1.525-1.5251.086
05-0.5070.039-1.5250.761
06-1.525-1.525-1.5251.208
070.786-1.525-0.507-0.013
080.761-1.5250.039-0.507
09-1.525-1.525-1.5251.208
10-1.159-1.1590.080.828