Model info
Transcription factorHoxd10
ModelHXD10_MOUSE.H11MO.0.D
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceIntegrative
Model releaseHOCOMOCOv9
Model length10
Quality
D
Motif rank
0
ConsensusTGnTYTWRTK
Best auROC (human)
Best auROC (mouse)
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)
Aligned words7
TF familyHOX-related factors{3.1.1}
TF subfamilyHOX9-13{3.1.1.8}
MGI96202
EntrezGene15430
UniProt IDHXD10_MOUSE
UniProt ACP28359
Comment
Downloads pcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 5.582655
0.0005 6.081795
0.0001 7.175549999999999
GTEx tissue expression atlas Hoxd10 expression
Motifs in JASPAR
PCM
ACGT
011.0750.2150.2155.495
021.720.05.280.0
030.863.5590.861.72
040.860.00.06.14
050.861.8390.04.301
060.00.00.07.0
074.4190.00.861.72
084.3010.01.8390.86
090.00.00.07.0
100.2150.2151.9364.634
PWM
ACGT
01-0.359-1.159-1.1590.984
02-0.013-1.5250.947-1.525
03-0.5070.593-0.507-0.013
04-0.507-1.525-1.5251.086
05-0.5070.039-1.5250.761
06-1.525-1.525-1.5251.208
070.786-1.525-0.507-0.013
080.761-1.5250.039-0.507
09-1.525-1.525-1.5251.208
10-1.159-1.1590.080.828