Model info
Transcription factorHOXD11
ModelHXD11_HUMAN.H11MO.0.D
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceHT-SELEX
Model releaseHOCOMOCOv10
Model length11
Quality
D
Motif rank
0
ConsensusdhTTTATKdnn
Best auROC (human)
Best auROC (mouse)
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)
Aligned words124
TF familyHOX-related factors{3.1.1}
TF subfamilyHOX9-13{3.1.1.8}
HGNC5134
EntrezGene3237
UniProt IDHXD11_HUMAN
UniProt ACP31277
Comment
Downloads pcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 5.92165
0.0005 6.47744
0.0001 7.4205
GTEx tissue expression atlas HOXD11 expression
ReMap ChIP-seq dataset list HOXD11 datasets
Motifs in JASPAR
PCM
ACGT
0140.7516.7523.7542.75
0232.514.512.564.5
034.03.013.0104.0
040.02.012.0110.0
0530.00.00.094.0
06103.00.018.03.0
071.035.00.088.0
083.253.2558.2559.25
0956.512.534.520.5
1029.7545.7520.7527.75
1132.2528.2521.2542.25
PWM
ACGT
010.264-0.584-0.2550.311
020.046-0.718-0.8540.713
03-1.822-2.036-0.8191.184
04-3.286-2.307-0.8921.239
05-0.032-3.286-3.2861.084
061.174-3.286-0.517-2.036
07-2.6810.117-3.2861.019
08-1.978-1.9780.6130.63
090.583-0.8540.103-0.395
10-0.040.377-0.383-0.106
110.038-0.089-0.3610.3