Model info
Transcription factorIRF4
ModelIRF4_HUMAN.H11MO.0.A
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length18
Quality
A
Motif rank
0
ConsensusvdWdRvGGAASTGARAvh
Best auROC (human)0.9512282861651095
Best auROC (mouse)0.9767382494934758
Peak sets in benchmark (human)19
Peak sets in benchmark (mouse)61
Aligned words500
TF familyInterferon-regulatory factors{3.5.3}
TF subfamilyIRF-4 (LSIRF, NF-EM5, MUM1, Pip){3.5.3.0.4}
HGNC6119
EntrezGene3662
UniProt IDIRF4_HUMAN
UniProt ACQ15306
Comment
Downloads pcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 4.01241
0.0005 5.19551
0.0001 7.63751
GTEx tissue expression atlas IRF4 expression
ReMap ChIP-seq dataset list IRF4 datasets
Motifs in JASPAR
PCM
ACGT
01177.088.0162.073.0
02265.056.096.083.0
03326.036.056.082.0
04244.030.097.0129.0
05118.063.0287.032.0
06256.073.0152.019.0
07107.02.0380.011.0
0815.08.0476.01.0
09485.09.02.04.0
10480.02.05.013.0
1129.0219.0240.012.0
1234.042.011.0413.0
1318.08.0472.02.0
14450.02.042.06.0
15346.014.0130.010.0
16468.016.09.07.0
1784.0222.0175.019.0
18104.0138.047.0211.0
PWM
ACGT
010.344-0.3460.256-0.529
020.745-0.788-0.26-0.403
030.951-1.215-0.788-0.415
040.663-1.389-0.250.031
05-0.057-0.6730.824-1.328
060.711-0.5290.193-1.818
07-0.153-3.5731.104-2.311
08-2.034-2.5841.328-3.903
091.347-2.484-3.573-3.126
101.336-3.573-2.961-2.163
11-1.4210.5550.646-2.234
12-1.27-1.067-2.3111.187
13-1.868-2.5841.32-3.573
141.272-3.573-1.067-2.819
151.01-2.0960.039-2.394
161.311-1.975-2.484-2.694
17-0.3920.5690.333-1.818
18-0.1810.098-0.9580.519