Model info
Transcription factorLef1
ModelLEF1_MOUSE.H11MO.0.B
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length14
Quality
B
Motif rank
0
ConsensusbSYTTTSWhnKbhh
Best auROC (human)0.8760749217558853
Best auROC (mouse)
Peak sets in benchmark (human)20
Peak sets in benchmark (mouse)
Aligned words456
TF familyTCF-7-related factors{4.1.3}
TF subfamilyLEF-1 (TCF-1alpha) [1]{4.1.3.0.4}
MGI96770
EntrezGene16842
UniProt IDLEF1_MOUSE
UniProt ACP27782
Comment
Downloads pcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 5.99681
0.0005 6.66341
0.0001 7.93141
GTEx tissue expression atlas Lef1 expression
Motifs in JASPAR
PCM
ACGT
0135.0119.0125.0177.0
0215.0290.084.067.0
038.0323.06.0119.0
0456.021.09.0370.0
051.063.016.0376.0
061.06.015.0434.0
0720.0194.0237.05.0
08208.063.07.0178.0
09127.076.072.0181.0
10130.087.092.0147.0
1119.059.068.0310.0
1218.0142.0175.0121.0
1353.0210.041.0152.0
14143.0101.047.0165.0
PWM
ACGT
01-1.1510.0420.0910.435
02-1.9440.926-0.301-0.522
03-2.4951.033-2.7310.042
04-0.697-1.635-2.3951.168
05-3.821-0.582-1.8861.184
06-3.821-2.731-1.9441.327
07-1.680.5260.725-2.873
080.595-0.582-2.6060.441
090.107-0.399-0.4520.457
100.13-0.266-0.2110.251
11-1.728-0.646-0.5080.992
12-1.7780.2170.4240.059
13-0.7510.605-0.9990.284
140.224-0.119-0.8670.366