Model info
Transcription factorMbd2
ModelMBD2_MOUSE.H11MO.0.B
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceIntegrative
Model releaseHOCOMOCOv9
Model length11
Quality
B
Motif rank
0
ConsensusnSGGCCGGMKv
Best auROC (human)
Best auROC (mouse)
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)
Aligned words113
TF family
TF subfamily
MGI1333813
EntrezGene17191
UniProt IDMBD2_MOUSE
UniProt ACQ9Z2E1
Comment
Downloads pcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 1.82062
0.0005 2.68219
0.0001 4.3813
GTEx tissue expression atlas Mbd2 expression
ReMap ChIP-seq dataset list Mbd2 datasets
Motifs in JASPAR
PCM
ACGT
0116.77844.41344.4134.935
025.92243.42651.3229.87
030.027.63582.9040.0
040.00.057.24353.295
050.0110.5390.00.0
060.0110.5390.00.0
070.00.0110.5390.0
080.00.0110.5390.0
0959.21739.47811.8430.0
1011.84311.84365.13921.713
1135.5313.81753.2957.896
PWM
ACGT
01-0.4730.4590.459-1.551
02-1.4010.4370.6-0.959
03-3.1980.01.071-3.198
04-3.198-3.1980.7070.637
05-3.1981.355-3.198-3.198
06-3.1981.355-3.198-3.198
07-3.198-3.1981.355-3.198
08-3.198-3.1981.355-3.198
090.740.344-0.794-3.198
10-0.794-0.7940.834-0.23
110.242-0.6530.637-1.156