Model info
Transcription factorMbd2
ModelMBD2_MOUSE.H11MO.0.B
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceIntegrative
Model releaseHOCOMOCOv9
Model length11
Quality
B
Motif rank
0
ConsensusnSGGCCGGMKv
Best auROC (human)
Best auROC (mouse)
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)
Aligned words113
TF family
TF subfamily
MGI1333813
EntrezGene17191
UniProt IDMBD2_MOUSE
UniProt ACQ9Z2E1
Comment
Downloads pcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 1.8211300000000001
0.0005 2.6727300000000005
0.0001 4.380465000000001
GTEx tissue expression atlas Mbd2 expression
Motifs in JASPAR
PCM
ACGT
0116.77844.41344.4134.935
025.92243.42651.3229.87
030.027.63582.9040.0
040.00.057.24353.295
050.0110.5390.00.0
060.0110.5390.00.0
070.00.0110.5390.0
080.00.0110.5390.0
0959.21739.47811.8430.0
1011.84311.84365.13921.713
1135.5313.81753.2957.896
PWM
ACGT
01-0.4730.4590.459-1.551
02-1.4010.4370.6-0.959
03-3.1980.01.071-3.198
04-3.198-3.1980.7070.637
05-3.1981.355-3.198-3.198
06-3.1981.355-3.198-3.198
07-3.198-3.1981.355-3.198
08-3.198-3.1981.355-3.198
090.740.344-0.794-3.198
10-0.794-0.7940.834-0.23
110.242-0.6530.637-1.156