Model info
Transcription factorMeis1
ModelMEIS1_MOUSE.H11MO.0.A
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length12
Quality
A
Motif rank
0
ConsensusdTGATWdATddb
Best auROC (human)0.8163985059303714
Best auROC (mouse)0.9454270055056839
Peak sets in benchmark (human)2
Peak sets in benchmark (mouse)37
Aligned words499
TF familyTALE-type homeo domain factors{3.1.4}
TF subfamilyMEIS{3.1.4.2}
MGI104717
EntrezGene17268
UniProt IDMEIS1_MOUSE
UniProt ACQ60954
Comment
Downloads pcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 5.34242
0.0005 6.19232
0.0001 7.96065
GTEx tissue expression atlas Meis1 expression
Motifs in JASPAR
PCM
ACGT
01220.063.0126.090.0
0294.01.08.0396.0
0337.010.0441.011.0
04489.03.03.04.0
0516.019.019.0445.0
0664.05.053.0377.0
0796.016.0130.0257.0
08487.02.08.02.0
0917.035.015.0432.0
1077.022.0265.0135.0
11152.032.0222.093.0
1262.0187.0128.0122.0
PWM
ACGT
010.562-0.6710.01-0.322
02-0.279-3.901-2.5821.147
03-1.187-2.3921.254-2.309
041.357-3.323-3.323-3.124
05-1.973-1.816-1.8161.263
06-0.656-2.959-0.841.098
07-0.258-1.9730.0410.716
081.353-3.571-2.582-3.571
09-1.918-1.24-2.0321.233
10-0.475-1.6790.7470.078
110.195-1.3260.571-0.29
12-0.6870.4010.025-0.022