Model info
Transcription factorMeis1
ModelMEIS1_MOUSE.H11MO.0.A
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length12
Quality
A
Motif rank
0
ConsensusdTGATWdATddb
Best auROC (human)0.816
Best auROC (mouse)0.945
Peak sets in benchmark (human)2
Peak sets in benchmark (mouse)37
Aligned words499
TF familyTALE-type homeo domain factors {3.1.4}
TF subfamilyMEIS {3.1.4.2}
MGIMGI:104717
EntrezGeneGeneID:17268
(SSTAR profile)
UniProt IDMEIS1_MOUSE
UniProt ACQ60954
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 5.34746
0.0005 6.1891099999999994
0.0001 7.959764999999999
GTEx tissue expression atlas Meis1 expression
Motifs in JASPAR
PCM
ACGT
01220.063.0126.090.0
0294.01.08.0396.0
0337.010.0441.011.0
04489.03.03.04.0
0516.019.019.0445.0
0664.05.053.0377.0
0796.016.0130.0257.0
08487.02.08.02.0
0917.035.015.0432.0
1077.022.0265.0135.0
11152.032.0222.093.0
1262.0187.0128.0122.0
PWM
ACGT
010.562-0.6710.01-0.322
02-0.279-3.901-2.5821.147
03-1.187-2.3921.254-2.309
041.357-3.323-3.323-3.124
05-1.973-1.816-1.8161.263
06-0.656-2.959-0.841.098
07-0.258-1.9730.0410.716
081.353-3.571-2.582-3.571
09-1.918-1.24-2.0321.233
10-0.475-1.6790.7470.078
110.195-1.3260.571-0.29
12-0.6870.4010.025-0.022