Model info
Transcription factorMGA
ModelMGAP_HUMAN.H11MO.0.D
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceHT-SELEX
Model releaseHOCOMOCOv10
Model length16
Quality
D
Motif rank
0
ConsensusRRGTGTKAnWTWTMRC
Best auROC (human)
Best auROC (mouse)
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)
Aligned words6178
TF familybHLH-ZIP factors{1.2.6};
TBX6-related factors{6.5.5}
TF subfamilyMad-like factors{1.2.6.7};
MGA (MAD5){6.5.5.0.2}
HGNC14010
EntrezGene23269
UniProt IDMGAP_HUMAN
UniProt ACQ8IWI9
Comment
Downloads pcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 1.45621
0.0005 2.83531
0.0001 5.70601
GTEx tissue expression atlas MGA expression
ReMap ChIP-seq dataset list MGA datasets
Motifs in JASPAR
PCM
ACGT
014018.25288.251204.25665.25
02721.0534.04585.0336.0
0387.5126.55868.593.5
0462.5605.562.55445.5
051.01.06173.01.0
06150.0467.070.05489.0
0777.0352.04702.01045.0
085923.015.0204.034.0
093504.0568.0568.01536.0
102718.0220.0368.02870.0
11866.5210.5157.54941.5
12610.5497.5237.54830.5
13207.0211.034.05724.0
14779.04764.0416.0217.0
154043.0168.01336.0629.0
1651.56008.542.573.5
PWM
ACGT
010.956-1.672-0.248-0.84
02-0.76-1.0591.087-1.52
03-2.847-2.4861.334-2.783
04-3.174-0.934-3.1741.259
05-6.186-6.1861.385-6.186
06-2.318-1.193-3.0641.267
07-2.972-1.4741.113-0.39
081.343-4.5-2.015-3.755
090.819-0.998-0.998-0.005
100.565-1.94-1.430.619
11-0.577-1.984-2.271.162
12-0.926-1.13-1.8641.14
13-2.0-1.981-3.7551.309
14-0.6831.126-1.308-1.954
150.962-2.207-0.144-0.896
16-3.361.358-3.544-3.017