Model info
Transcription factorMITF
ModelMITF_HUMAN.H11MO.0.A
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length10
Quality
A
Motif rank
0
ConsensusYCACGTGACh
Best auROC (human)0.9988033719615479
Best auROC (mouse)0.8240111255657054
Peak sets in benchmark (human)28
Peak sets in benchmark (mouse)3
Aligned words516
TF familybHLH-ZIP factors{1.2.6}
TF subfamilyTFE3-like factors{1.2.6.1}
HGNC7105
EntrezGene4286
UniProt IDMITF_HUMAN
UniProt ACO75030
Comment
Downloads pcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 2.84965
0.0005 4.00992
0.0001 6.30016
GTEx tissue expression atlas MITF expression
ReMap ChIP-seq dataset list MITF datasets
Motifs in JASPAR
PCM
ACGT
0127.0119.057.0297.0
020.0499.01.00.0
03440.013.06.041.0
040.0365.08.0127.0
052.09.0489.00.0
062.00.06.0492.0
070.03.0497.00.0
08445.019.028.08.0
090.0383.023.094.0
1072.0262.036.0130.0
PWM
ACGT
01-1.489-0.049-0.7710.858
02-4.41.375-3.903-4.4
031.25-2.163-2.819-1.09
04-4.41.063-2.5840.016
05-3.573-2.4841.355-4.4
06-3.573-4.4-2.8191.361
07-4.4-3.3251.371-4.4
081.261-1.818-1.454-2.584
09-4.41.111-1.64-0.281
10-0.5430.734-1.2150.039