Model info
Transcription factorMIXL1
ModelMIXL1_HUMAN.H11MO.0.D
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceHT-SELEX
Model releaseHOCOMOCOv10
Model length11
Quality
D
Motif rank
0
ConsensusvbTAATTvvdn
Best auROC (human)
Best auROC (mouse)
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)
Aligned words220
TF familyPaired-related HD factors{3.1.3}
TF subfamilyMIX{3.1.3.14}
HGNC13363
EntrezGene83881
UniProt IDMIXL1_HUMAN
UniProt ACQ9H2W2
Comment
Downloads pcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 5.59752
0.0005 6.43635
0.0001 7.92592
GTEx tissue expression atlas MIXL1 expression
ReMap ChIP-seq dataset list MIXL1 datasets
Motifs in JASPAR
PCM
ACGT
0140.2529.25130.2520.25
0226.558.546.588.5
036.05.05.0204.0
04209.250.258.252.25
05216.03.01.00.0
060.00.01.0219.0
072.012.06.0200.0
08115.530.548.525.5
0976.030.097.017.0
10119.028.041.032.0
1119.2540.2540.25120.25
PWM
ACGT
01-0.303-0.6110.848-0.959
02-0.7050.06-0.1640.467
03-2.037-2.183-2.1831.293
041.318-3.563-1.77-2.751
051.35-2.562-3.178-3.733
06-3.733-3.733-3.1781.364
07-2.823-1.44-2.0371.273
080.729-0.571-0.123-0.741
090.317-0.5860.557-1.122
100.759-0.652-0.286-0.525
11-1.006-0.303-0.3030.769