Model info
Transcription factorMycn
ModelMYCN_MOUSE.H11MO.0.A
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length8
Quality
A
Motif rank
0
ConsensusSCRCGTGK
Best auROC (human)0.896678580918821
Best auROC (mouse)0.9277055131234568
Peak sets in benchmark (human)32
Peak sets in benchmark (mouse)10
Aligned words508
TF familybHLH-ZIP factors{1.2.6}
TF subfamilyMyc / Max factors{1.2.6.5}
MGI97357
EntrezGene18109
UniProt IDMYCN_MOUSE
UniProt ACP03966
Comment
Downloads pcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 3.63794
0.0005 4.51573
0.0001 6.11621
GTEx tissue expression atlas Mycn expression
ReMap ChIP-seq dataset list Mycn datasets
Motifs in JASPAR
PCM
ACGT
016.0243.0168.083.0
0240.0443.010.07.0
03297.06.0139.058.0
041.0490.05.04.0
0569.011.0412.08.0
061.00.01.0498.0
071.01.0496.02.0
0821.062.0323.094.0
PWM
ACGT
01-2.8190.6590.293-0.403
02-1.1141.256-2.394-2.694
030.858-2.8190.105-0.754
04-3.9031.357-2.961-3.126
05-0.584-2.3111.184-2.584
06-3.903-4.4-3.9031.373
07-3.903-3.9031.369-3.573
08-1.725-0.6890.942-0.281