Model info
Transcription factorNFIC
ModelNFIC_HUMAN.H11MO.0.A
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length17
Quality
A
Motif rank
0
ConsensusbYKGGMhbChdKCCMdv
Best auROC (human)0.9451146318874781
Best auROC (mouse)0.47224734611324826
Peak sets in benchmark (human)18
Peak sets in benchmark (mouse)1
Aligned words500
TF familyNuclear factor 1{7.1.2}
TF subfamilyNF-1C (NF-IC){7.1.2.0.3}
HGNC7786
EntrezGene4782
UniProt IDNFIC_HUMAN
UniProt ACP08651
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 4.651909999999999
0.0005 5.59901
0.0001 7.539860000000001
GTEx tissue expression atlas NFIC expression
ReMap ChIP-seq dataset list NFIC datasets
Motifs in JASPAR
PCM
ACGT
0159.0244.0106.091.0
0238.0218.018.0226.0
0333.011.084.0372.0
047.04.0458.031.0
0521.016.0445.018.0
06102.0340.029.029.0
07159.0127.032.0182.0
0846.0207.0126.0121.0
090.0301.00.0199.0
10117.0200.087.096.0
11143.045.090.0222.0
1210.044.0314.0132.0
1312.0429.023.036.0
149.0481.04.06.0
15335.0122.07.036.0
16228.035.0189.048.0
17107.0111.0229.053.0
PWM
ACGT
01-0.7370.663-0.163-0.313
02-1.1630.551-1.8680.587
03-1.298-2.311-0.3921.082
04-2.694-3.1261.29-1.358
05-1.725-1.9751.261-1.868
06-0.2010.993-1.421-1.421
070.2380.016-1.3280.372
08-0.9790.50.008-0.032
09-4.40.872-4.40.46
10-0.0650.465-0.357-0.26
110.133-1.0-0.3240.569
12-2.394-1.0220.9140.054
13-2.2341.224-1.64-1.215
14-2.4841.338-3.126-2.819
150.978-0.024-2.694-1.215
160.595-1.2420.409-0.938
17-0.153-0.1170.6-0.841